Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1107 ATGGCCTTGTCAAGTCCACACATACAAAGATTCCTCTTATGCAAGCTTCATAGCCGCTCCACCGCCAAGAACAGACACAGAAACAGCTTCACCGCCACAACCACCACCAGGAGCAGTTGCTGCTCTGCCATAGCCATTGATGCTCCGTCGTCTTTGACCGAAGTGCCCGGCATAAGATGGGGGTCCATAGCCTTGCAGGGTCTCCGTGAAGAGATGGAGGATGATATTATTGTTCGACCTGAGGGCCTTCAGGGCTTCACTTTTGCAGCTGTGTTTGATGGCCATGGAGGGTTTTCTTCTGTCGAGTTCCTCAGTGCCAACTACAGGGATGAGCTGTACAAGGAGTGTGTTGAAGCTTTACAAGGTGGGTTACTATTAGTCGAGAAAGATTTCAAAGCCATTAAAAGGGCATTACAGGAGGCATTTCTCAAGGCTGACGCGAGGTTATTAAAACGGCTTGAAATGAATGGAGAGGAGGATGAATCAGGTGCTACATCAACTGCCGTGTTCATTGGAGATGATGAGCTGCTAATTTCACATATTGGTGACTCATCAGCGGTTCTATGTAGATCTGGAAAAGCAGAAGTTCTGACTAGTCCTCACCGTCCAATTGGGAGCAGCAAGACTTCTCTTCATGAAATTAGAAGAGTCAGAGAAGCAGGTGGATGGATTAACAATGGTAGAATTTGTGGAGACATTGCTGTATCTCGTGCATTTGGGGACGTGCGATTCAAAACAAAGAAGAATGAGATGCTGCAAAAAGGAGTTCAGGAAGGAAGATGGTCAGCAAAGTTCATTTCTCGTGTACAACTCAACAACGACTTGGTTGTTGCATACCCTGATATTTATCAAGTAACTCTTGGCTCAGATGCAGAATTTGTAGTATTAGCATCCGATGGCTTATGGGATTACATGAGCAGCTCAGAAGCAGTTTCTTTAGTGAGGGATCAACTACGAAAACACGGAAACATTCAGCAAGCATGTGAAGCGCTTGCAGAAGCCGCTTTGGACCGACGTACACAGGATAATGTCAGCATTATAATTGCTGATTTTGGGAGGACAGACTGGCAGAATGCGCCATTGGAGCGACAAAATACTATACTTGAGCTGGTCCAAGCTCTTGCAACCATTGGAATTGTGTCCATTGGAATCTGGTTTTCATCACAGCTTTCTTTATAG 1179 0.4563 MALSSPHIQRFLLCKLHSRSTAKNRHRNSFTATTTTRSSCCSAIAIDAPSSLTEVPGIRWGSIALQGLREEMEDDIIVRPEGLQGFTFAAVFDGHGGFSSVEFLSANYRDELYKECVEALQGGLLLVEKDFKAIKRALQEAFLKADARLLKRLEMNGEEDESGATSTAVFIGDDELLISHIGDSSAVLCRSGKAEVLTSPHRPIGSSKTSLHEIRRVREAGGWINNGRICGDIAVSRAFGDVRFKTKKNEMLQKGVQEGRWSAKFISRVQLNNDLVVAYPDIYQVTLGSDAEFVVLASDGLWDYMSSSEAVSLVRDQLRKHGNIQQACEALAEAALDRRTQDNVSIIIADFGRTDWQNAPLERQNTILELVQALATIGIVSIGIWFSSQLSL* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1107 392 SUPERFAMILY PP2C-like 51 352 IPR036457 -
Gso6g1107 392 ProSitePatterns PPM-type phosphatase domain signature. 88 96 IPR000222 GO:0043169
Gso6g1107 392 Gene3D - 58 358 IPR036457 -
Gso6g1107 392 Pfam Protein phosphatase 2C 61 344 IPR001932 -
Gso6g1107 392 CDD PP2Cc 58 351 IPR001932 -
Gso6g1107 392 PANTHER PROTEIN PHOSPHATASE 2C 57 6 388 - -
Gso6g1107 392 ProSiteProfiles PPM-type phosphatase domain profile. 59 351 IPR001932 -
Gso6g1107 392 PANTHER PROTEIN PHOSPHATASE 2C 6 388 IPR015655 GO:0004722|GO:0006470
Gso6g1107 392 SMART PP2C_SIG_2 71 351 IPR001932 -
Gso6g1107 392 SMART PP2C_4 49 349 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1107 Gso-Chr6 10824903 10829268 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1107 6 10824903 10829268 Gso17g2088 17 40559700 40562136 PCT