Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0701 ATGGAACAGAGCGAAACGGCGTCGGATTTAGCTCCGAGGAAATTGGTTCGCCAATTGAATTTCGCCGCCGTTTACGGAGATCCGTCGCACCTGAAACTGCCTCCACCGTCACCGTCACCGTCACCGCCACCGCCGTCGCATTCTCCGTTGCGATTGCAATTGGATTTGCTGCCGCCGGGGCAACGGCCGTGGTTATGTTCAGAGCCGCAGGAACAACAGGCGTGGTTATATTCACCGCGGCTGAAGCTAGTTTCGCCGGTTCGACGAATTCCGCACCCCGTGAAGAAGCTTCCGGTGAAGGTGTTGCAAGTGGCAAAGCCGAAGTCTCCTAGATCACAACCTCAATGTAATGTGGAATTGAAGGACACCACTCCAAAGAAACAGAAACAGTGTAACTGCAAAAATTCTAGATGCCTCAAGTTGTACTGTGAGTGTTTTGCAGCTGGGATCTATTGTGATGGCTGCAACTGTGTAAATTGCCATAATAATGTGGATAATGAGGCTGCCAGACAGGAGGCAGTTGGAATAACATTGGAACGCAATCCAAATGCTTTCAGACCAAAAATTGCTAGCAGTCCGCTAGAAAGAAGAGATTCCAAGGAATGTGAAATTCAAGTAATAGGAAAGCACAATAAAGGATGTCACTGCAAGAAATCAGGTTGCCTTAAGAAGTATTGTGAGTGCTTCCAAGCCAATATCCTCTGCTCTGAAAATTGTAAATGCATGGACTGCAAGAATTTTGAAGGAAGTGATGAAAGAAGAGCAATTTTTCACAAAGATTATAATCTAGTTCACATCAAACAGGCAGCTAATGCTACCATTAGTCGAGTTGCTGGATCATCTGGCTATGGAACCCATTTAACACCCAAGAAGAGAAAAATTCATGAAATGTTTCCTGGAAAGTCAGCCATGGATCAAACTGATAACATTACTGCTCAATACCAACAGGAAATTGATCCTATGGCTTCATCGCCTTCATTTCTGTCAGATTCGTTTGTTTCTGACCCTTCCAACACAAGAATTTCAGCGTCTTCAAGATCTACATACCGGTCCGTATTGGCAGATTTCTTCCAGCCACAAAATGTGAAGAATCTCTGTTCACTTTTTGTTGTTCTCTCACAAGTAGCTGCTAAGACAAATGCAGAAATGATAGGCAAAGTAGACCAGCAAACAAAAACTGGGAACTTTGAAGCTTCTGTTGCTTCATCATCTAAATCACTGCAAGAAACTAGAGATGTCCACCAGCTTGTTTGTGATGATCACGTGAATAAAGATGAAGCAGATGCAGTTGATATTGCTAATTATAATAGGCCATTGTCACCAGAAACACTGGCATTGATGTGTGATGAACAGGATGATATGATTTTTGGAAATAGTTCTGCAAATGGAGTTGCATGCAACAGCACTTTGCAAAACATGATTCAAAAGTCATCTAATTCTGATGGATGCACTGATGTTTGCAGAGAGCAGGAAAGGCTTATATTGACCAAGTTCTTGGACGTTCTTCGCGGACTCGTTACTCACGGTAGCATCAAAGAAACAATGTGCTCTTCATCGACCAAGAAAGGGGAGAGAAGCAAGAAAGAGCCTGCAGACAATGCCAATATTGGTGCTGAAACTAACGTTGGGAGAGAGAAGGGAATTCATAACAACTCCTTTGGCAATTACCTCATCCCATCTGTTACTAAAATATCCCAGACAAATTATGCCGTAACTAATGGACATGGTAATAATGATCTTTCGTTGACCTGA 1752 0.4321 MEQSETASDLAPRKLVRQLNFAAVYGDPSHLKLPPPSPSPSPPPPSHSPLRLQLDLLPPGQRPWLCSEPQEQQAWLYSPRLKLVSPVRRIPHPVKKLPVKVLQVAKPKSPRSQPQCNVELKDTTPKKQKQCNCKNSRCLKLYCECFAAGIYCDGCNCVNCHNNVDNEAARQEAVGITLERNPNAFRPKIASSPLERRDSKECEIQVIGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSDERRAIFHKDYNLVHIKQAANATISRVAGSSGYGTHLTPKKRKIHEMFPGKSAMDQTDNITAQYQQEIDPMASSPSFLSDSFVSDPSNTRISASSRSTYRSVLADFFQPQNVKNLCSLFVVLSQVAAKTNAEMIGKVDQQTKTGNFEASVASSSKSLQETRDVHQLVCDDHVNKDEADAVDIANYNRPLSPETLALMCDEQDDMIFGNSSANGVACNSTLQNMIQKSSNSDGCTDVCREQERLILTKFLDVLRGLVTHGSIKETMCSSSTKKGERSKKEPADNANIGAETNVGREKGIHNNSFGNYLIPSVTKISQTNYAVTNGHGNNDLSLT* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0701 583 MobiDBLite consensus disorder prediction 31 49 - -
Gso6g0701 583 MobiDBLite consensus disorder prediction 515 545 - -
Gso6g0701 583 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 1 551 - -
Gso6g0701 583 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 128 163 IPR005172 -
Gso6g0701 583 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 212 246 IPR005172 -
Gso6g0701 583 SMART CXC_2 209 250 IPR033467 -
Gso6g0701 583 SMART CXC_2 126 166 IPR033467 -
Gso6g0701 583 MobiDBLite consensus disorder prediction 518 532 - -
Gso6g0701 583 PANTHER TESMIN/TSO1-RELATED 1 551 IPR028307 -
Gso6g0701 583 ProSiteProfiles CRC domain profile. 127 249 IPR005172 -
Gso6g0701 583 MobiDBLite consensus disorder prediction 26 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0701 Gso-Chr6 6448139 6453843 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0701 107 563 CPP Transcription Factor Family AT4G29000 46.947 2.36e-125 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Gso6g0701 TCR 3.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0701 - K21776 gmx:100812944 1142.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0697 4 6818273 6824367 Gso6g0701 6 6448139 6453843 GST