Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0426 ATGAGCGCAGCGGATGATGACGAGCCAGAAAGGAGAAGAAGATTGAAAGCGTCGAATAGTGGTGGGTTGAAGAGCTTTCAGCGCGATCTGATCGCTGGGGCGGTGATGGGTGGTGGGGTGCACACGATTGTGGCCCCAATCGAGAGGGCGAAGCTCTTGTTGCAGACCCAAGAGAGCAATTTGGCGATTGTGGCGAGTGGGCGTCGCAGATTCAAGGGTATGTTGGATTGCATAGCCCGTACGGTCAGGGAAGAAGGCATTCTCTCTTTGTGGAGAGGCAATGGCAGCAGTGTTATTCGTTACTATCCTTCTGTCGCTCTCAATTTCTCTCTCAAGGATCTATACAAAAGCATGCTAAGAGGTGGAAACTCTAGTGACAATCTTTTGCCAGGTGCCACTGCTAATTTTGCTGCGGGGGCTGCTGCCGGCTGTACCACGCTTGTGATGGTATACCCCCTTGACATAGCACACACGCGCCTTGCCGCCGACATTGGAAGGAGAGAAGTGCGCCAATTTCGAGGCATTTACCATTTCTTGGCTACCATATTCCACAAGGATGGCGTTCGGGGGATCTACAAGGGCCTTCCTGCATCTCTACATGGGATGGTGGTACACAGGGGCCTTTATTTTGGAGGCTTTGATACCATGAAAGAGATCATGTCTGAAGAATCAAAACCCGAGTTGGCATTGTGGAAGCGTTGGGTGGTAGCTCAGGCAGTCACAACCTCTGCTGGCTTGATATCTTATCCGTTAGACACGGTCCGTAGGAGGATGATGATGCAGTCTGGCATTGAACAGCCAGTGTACAATAGCACCCTGGACTGCTGGAGGAAGATCTATAGAACAGAAGGGTTGGCTTCATTTTACCGTGGTGCAGTTTCTAATGTGTTTAGGAGCACAGGAGCAGCAGCTATCTTAGTCTTGTATGATGAGGTTAAGAAATTTATGAACTGGGGGAGAATTTAA 966 0.5 MSAADDDEPERRRRLKASNSGGLKSFQRDLIAGAVMGGGVHTIVAPIERAKLLLQTQESNLAIVASGRRRFKGMLDCIARTVREEGILSLWRGNGSSVIRYYPSVALNFSLKDLYKSMLRGGNSSDNLLPGATANFAAGAAAGCTTLVMVYPLDIAHTRLAADIGRREVRQFRGIYHFLATIFHKDGVRGIYKGLPASLHGMVVHRGLYFGGFDTMKEIMSEESKPELALWKRWVVAQAVTTSAGLISYPLDTVRRRMMMQSGIEQPVYNSTLDCWRKIYRTEGLASFYRGAVSNVFRSTGAAAILVLYDEVKKFMNWGRI* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0426 321 PANTHER ADP,ATP CARRIER PROTEIN-RELATED 23 320 - -
Gso6g0426 321 Gene3D Mitochondrial carrier domain 28 318 IPR023395 -
Gso6g0426 321 ProSiteProfiles Solute carrier (Solcar) repeat profile. 130 219 IPR018108 -
Gso6g0426 321 MobiDBLite consensus disorder prediction 1 20 - -
Gso6g0426 321 Pfam Mitochondrial carrier protein 25 120 IPR018108 -
Gso6g0426 321 Pfam Mitochondrial carrier protein 132 222 IPR018108 -
Gso6g0426 321 Pfam Mitochondrial carrier protein 229 317 IPR018108 -
Gso6g0426 321 SUPERFAMILY Mitochondrial carrier 24 311 IPR023395 -
Gso6g0426 321 ProSiteProfiles Solute carrier (Solcar) repeat profile. 232 315 IPR018108 -
Gso6g0426 321 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 23 320 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gso6g0426 321 PRINTS Adenine nucleotide translocator signature 26 38 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gso6g0426 321 PRINTS Adenine nucleotide translocator signature 71 92 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gso6g0426 321 PRINTS Adenine nucleotide translocator signature 104 116 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gso6g0426 321 PRINTS Adenine nucleotide translocator signature 130 143 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gso6g0426 321 PRINTS Adenine nucleotide translocator signature 233 249 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gso6g0426 321 MobiDBLite consensus disorder prediction 1 17 - -
Gso6g0426 321 ProSiteProfiles Solute carrier (Solcar) repeat profile. 24 118 IPR018108 -
Gso6g0426 321 PRINTS Mitochondrial carrier protein signature 29 42 IPR002067 GO:0055085
Gso6g0426 321 PRINTS Mitochondrial carrier protein signature 42 56 IPR002067 GO:0055085
Gso6g0426 321 PRINTS Mitochondrial carrier protein signature 93 113 IPR002067 GO:0055085
Gso6g0426 321 PRINTS Mitochondrial carrier protein signature 145 163 IPR002067 GO:0055085
Gso6g0426 321 PRINTS Mitochondrial carrier protein signature 192 210 IPR002067 GO:0055085
Gso6g0426 321 PRINTS Mitochondrial carrier protein signature 237 259 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0426 Gso-Chr6 3939094 3944388 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0426 26 318 Antiporters AT5G17400 38.538 8.39e-66 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0426 K05863 - gmx:100807764 624.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0444 4 4189830 4194692 Gso6g0426 6 3939094 3944388 GST