Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso6g0355 | ATGCAGAGAAAGAGAAGGCCAATGATTGATTACATGGACAAAGTTCAGAAACAAGTTACGACAACTATGAGGACAATATTGGTGGATTGGTTGGTAGAGGTAGCTGAGGAGTACAAGCTTCTCTCCGATACCCTTCATCTATCTGTTTCGTACATCGATAGGTTTTTGTCTGTTAATCCTGTTAGCAAATCAAGACTTCAGTTACTGGGTGTTTCATCCATGCTCATTGCTGCCAAGTATGAGGAAGTTGACCCACCCCGTGTTGACCCGTTCTGCAACATCACTGATAACACATACCACAAGGCAGAGGTTGTAAAGATGGAAGCTGACATGCTCACGACCCTAAAGTTTGAGATGGGAAATCCAACTGTAAACACCTTTCTAAGGAGGTTTGCAAATGTTGCTTCTGAGAACCAAAAAACACCAAATTTGCAGATTGAATTTTTGGTTGGCTACCTTGCTGAGCTAAGCTTGCTGGACTATGATTGTTTAAGATTCTCGCCTTCTATCATGGCTGCATCAGTTATATTTCTTGCCAGGTTTATTATCTGGCCTGAAGTGCATCCTTGGACTTCTTTGTCTGAATGCTTGGGTTATGAACCAGCTGATTGA | 612 | 0.4216 | MQRKRRPMIDYMDKVQKQVTTTMRTILVDWLVEVAEEYKLLSDTLHLSVSYIDRFLSVNPVSKSRLQLLGVSSMLIAAKYEEVDPPRVDPFCNITDNTYHKAEVVKMEADMLTTLKFEMGNPTVNTFLRRFANVASENQKTPNLQIEFLVGYLAELSLLDYDCLRFSPSIMAASVIFLARFIIWPEVHPWTSLSECLGYEPAD* | 204 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso6g0355 | 203 | SUPERFAMILY | Cyclin-like | 99 | 197 | IPR036915 | - | |
| Gso6g0355 | 203 | ProSitePatterns | Cyclins signature. | 24 | 55 | IPR006671 | - | |
| Gso6g0355 | 203 | PANTHER | CYCLIN-A3-1-RELATED | 3 | 203 | - | - | |
| Gso6g0355 | 203 | PANTHER | CYCLINS | 3 | 203 | IPR039361 | - | |
| Gso6g0355 | 203 | SMART | cyclin_7 | 29 | 113 | IPR013763 | - | |
| Gso6g0355 | 203 | SMART | cyclin_7 | 126 | 203 | IPR013763 | - | |
| Gso6g0355 | 203 | Gene3D | - | 115 | 203 | - | - | |
| Gso6g0355 | 203 | Pfam | Cyclin, N-terminal domain | 4 | 119 | IPR006671 | - | |
| Gso6g0355 | 203 | PIRSF | Cyclin_A_B_D_E | 1 | 202 | IPR039361 | - | |
| Gso6g0355 | 203 | CDD | CYCLIN | 122 | 199 | IPR013763 | - | |
| Gso6g0355 | 203 | Pfam | Cyclin, C-terminal domain | 122 | 201 | IPR004367 | - | |
| Gso6g0355 | 203 | CDD | CYCLIN | 23 | 112 | IPR013763 | - | |
| Gso6g0355 | 203 | SUPERFAMILY | Cyclin-like | 2 | 119 | IPR036915 | - | |
| Gso6g0355 | 203 | Gene3D | - | 7 | 114 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gso6g0355 | Gso-Chr6 | 3339440 | 3341711 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Gso6g0355 | 1 | 203 | Core Cell Cycle Gene Families | AT5G43080 | 63.235 | 1.55e-90 | 267 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gso4g0380 | 4 | 3474505 | 3477495 | Gso6g0355 | 6 | 3339440 | 3341711 | GST | |
| Gso14g0746 | 14 | 7785777 | 7789491 | Gso6g0355 | 6 | 3339440 | 3341711 | PCT | |
| Gso6g0355 | 6 | 3339440 | 3341711 | Gso14g0746 | 14 | 7785777 | 7789491 | PCT |