Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0347 ATGGGGGGTTGGGCTATAGCGGTGCATGGTGGCGCGGGTGTGGACCCTAATCTTCCACCAGAGCGTCAAGAGCAAGCCAAACAACTCCTCACTCGCGTTCTCAATCTTGGCATCTCTGCCCTTCGTTCCGATGCTTCTGCCCTCGACGTCGTCGAACTTGTCGTACGGGAACTGGAAACAGATCCCCTGTTCAACTCTGGTCGCGGAGCAGCTCTGACAGAAAAGGGAACAGCGGAATTGGAAGCAAGCATCATGGATGGTTACAAGAGACGATGCGGCGCCGTTTCGGGCGTCACCACCGTCAAAAATCCTATCTCACTCGCTCGTCTTGTCATGGAAAAGTCACCCCACTCCTACCTCGCCTTTAACGGCGCTGAAGATTTCGCCAGACAACAGGGAGTGGAGATTGTGGAGAACGAATACTTCATCACTCCTGAAAATGTTGGTATGCTGAAACTGGCAAAGGAAGCAAACACAATCCTGTTTGATTATAGGGTGCCATTGCAAAATGGATACGATAACTGCGGTGTGGAGGTTGAGAATCCATTGCAAATGAATGGACTGCCAATAAGCGTGTACGCGCCGGAGACGGTGGGGTGCGTGGTGGTGGACAGCGAGGGACGGTGCGCGGCTGCCACGTCGACAGGAGGGTTGATGAACAAGAAGTGCGGTAGGATCGGTGACTCACCACTAATAGGTGCAGGGACTTACGCGTGTAAGGTGTGTGGGGTTTCGTGCACTGGTGAAGGAGAAGCTATAATACGTGGCACGCTGGCGCGTGAGGTGGCAGCGGTGATGGAATATAAAGGACTGGGACTTGAGGAGGCAGTGGAGTATGTGATGGAGCACCGTTTGGATGGAGGGAAGGCAGGGTTGATCGCCGTGTCAAGTTCTGGTGAGGTGGCCTATGGATTCAACTCTAATGCAATGTTCAGGGCATGCGCCACCCAGGATGGATTCATGGAGGTTGGAATCTGGGAATAA 984 0.5346 MGGWAIAVHGGAGVDPNLPPERQEQAKQLLTRVLNLGISALRSDASALDVVELVVRELETDPLFNSGRGAALTEKGTAELEASIMDGYKRRCGAVSGVTTVKNPISLARLVMEKSPHSYLAFNGAEDFARQQGVEIVENEYFITPENVGMLKLAKEANTILFDYRVPLQNGYDNCGVEVENPLQMNGLPISVYAPETVGCVVVDSEGRCAAATSTGGLMNKKCGRIGDSPLIGAGTYACKVCGVSCTGEGEAIIRGTLAREVAAVMEYKGLGLEEAVEYVMEHRLDGGKAGLIAVSSSGEVAYGFNSNAMFRACATQDGFMEVGIWE* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0347 327 CDD Asparaginase_2 5 319 - -
Gso6g0347 327 Pfam Asparaginase 4 326 IPR000246 GO:0016787
Gso6g0347 327 Gene3D (Glycosyl)asparaginase 197 327 - -
Gso6g0347 327 PANTHER L-ASPARAGINASE 1 327 IPR000246 GO:0016787
Gso6g0347 327 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 324 IPR029055 -
Gso6g0347 327 PANTHER PEPTIDASE T2, ASPARAGINASE 2, NUCLEOPHILE AMINOHYDROLASE-RELATED 1 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0347 Gso-Chr6 3279384 3281014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0347 6 281 Miscellaneous Gene Families AT4G00590 25.329 1.52e-15 75.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0367 4 3359748 3361521 Gso6g0347 6 3279384 3281014 GST
Gso14g0741 14 7712165 7715024 Gso6g0347 6 3279384 3281014 PCT
Gso17g2025 17 39711760 39713677 Gso6g0347 6 3279384 3281014 PCT
Gso6g0347 6 3279384 3281014 Gso14g0741 14 7712165 7715024 PCT
Gso6g0347 6 3279384 3281014 Gso17g2025 17 39711760 39713677 PCT