Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0342 ATGGAAGCAGGGGAAGATTGCTGCGTCAAGGTCGCAGTTCATGTACGGCCACTCATCGCCGACGAGAAGCTTCAAGGATGCAAAGACTGCGTCACCATCGTTTCAGGGAAGCCGCAGGTACAAATTGGTGCCCACTCCTTTACATTTGATCATGTCTATGGAAGCACCGGTTCTCCCTCAAGTTCCATGTTTGAAGAATGCGTTGCTCCCCTTATTGATGGTTTGTTTCAAGGATATAATGCTACTGTTCTCGCATATGGTCAGACAGGTTCTGGGAAAACGTACACCATGGGAACTGGCTTTAAAGATGGTTGTCAAACAGGAATAGTACCCCAAGTTATGAATGTTTTGTTTAGCAAAATTGGGACCCTAAAGCACCAGATTGATTTTCAGTTGCATGTTTCCTTTATTGAGATTCTAAAAGAAGAAGTAAGAGACTTGCTGGATACCTCCTCCATGAGTAAACCAGAAACTGCAAACGGACATGCAGGAAAAATGACCTCTCCTGGGAAGCCACCAATACAAATTCGTGAGACATCAAATGGTGTCATCACCCTTGCAGGATCTACTGAAGTTAGTGTAGCAACACTAAAAGAAATGGCTGCTTGCTTGGAGCAGGGATCATTGAGCAGAGCAACTGGGAGCACAAATATGAACAACCAATCTAGTCGATCTCACGCCATCTTTACCATCACACTAGAGCAAATGCGCAAGCTCAATATTCCTGGTGACAGCTGTTCAAATGATACCATGAATGAAGAGTATCTTTGTGCCAAGTTGCACTTAGTAGATCTTGCTGGATCAGAACGAGCTAAAAGAACAGGTTCAGATGGTCTGCGTTTTAAGGAAGGAGTTCACATTAACAAAGGCCTCCTAGCACTTGGTAATGTTATTAGTGCACTTGGTGACGAAAAGAAGCGAAAGGAAGGTGTTCATGTTCCATATAGGGATAGTAAACTTACAAGGCTTTTGCAGGATTCACTAGGAGGTAACAGCAGAACTGTCATGATAGCCTGCATAAGTCCTGCTGATATTAATGCTGAGGAAACCCTTAACACTTTGAAGTATGCAAATCGTGCACGCAACATCCAAAATAAGCCTGTTATCAATAGAGACCCCATGTCCAATGAGATGCTAAAAATGCGACAACAACTAGAGTATTTGCAGGCAGAACTTTGTGCTCGTGCTGGCGCCTCTTCTGAGGAAGTTCAGGTCCTTAAGGAAAGAATTACTTGGCTTGAAGCTGCTAATGAAGATCTTTGCCGTGAACTTCATGAATACCGTAGTAGATGCCCTATTGTAGAACAAAGTGAAAGGGAAGCTTATGATGGTAGCACATACATTGTGAAGACTGATGCAGTTAAGAGGAGCTTACCTATCACAGAAGCTGAATATCCAATGAGTGAAACTGTGGGTGATTCTAGGGAAATGGAAGAAGTAGCAAAAGAGTGGGAGCACACACTTCTCCAGAATAGTATGGATAGAGAGTTACATGAATTGAATAAACGCTTGCAGCAGAAAGAGTCTGAGATGAAGCTTTTTGGAATATCTGATGCTGAAGTACTCAAGCAGCACTTTGGAAGAAAGATAATGGAATTAGAGGATGAGAAGAGAGTAGTGCAGAGAGAGAGAGATTGTCTTTTGGCTGAAGTTGAAAATCTTGCTGCCAATACTGATGGACAAACACAGAAATTAGAGGATATCCATGCCCAAAAATTGAAAACACTTGAAGCACAGATTCTGGATCTGAAGAAGAAGCAAGAGAGTCAGGTCCAACTTCTGAAGCAAAAGCAAAAAAGTGATGAAGCAGCAAAGAGACTGCAAGATGAAATACAGTGTATAAAAGCCCAAAAGGTTCAACTGCAGCAAAGGATAAAACAAGAAGCCGAACAGTTTCGGCAGTGGAAAGCGTCTAGAGAGAAAGAGCTGTTGCAATTAAAGAAGGAGGGAAGAAGAAATGAGTATGAAAGACACAAGCTGCAGGCTTTGAATCATCGGCAGAAATTGGTTCTTCAGAGAAAAACTGAAGAAGCTGCAATGGCCACCAAGAGGTTAAAGGAGTTGCTAGAAGCACGTAAAACTTCCAGCCGAGAAACTTTAGTTACAATGAATGGAAGTGGAGCAAATGGTCAGGGCAATGAGAAGTCTTTACAGCGGTGGCTTGATCATGAACTAGAAGTCATGGTAAAAGAGCATGAAGTCCGTTTTGAGTATGAGAAACAGAGCCAAGTGCGAGCTGCCCTTGCAGAGGAATTAGCCATGCTGAAGCAAGTAAATGAGTTTGCTGCAAAGGGTCTCAGTCCTCCAAGAAAGAATGGATTTGCCAGGGCATCCTCCATGTCACCAAATGCAAGAATGGCCAAAATAGCTTCACTTGAAAACATGCTGAGCATATCATCTAATTCACTTGTGGCAATGGCTTCTCAACTTTCCGAGGCAGAAGAAAGAGAACGAGCCTTCTCAAATCGTGGACGCTGGAATCAGCTGCGCTCTATGGGAGAAGCCAAGAATTTGCTTCAATATATGTTTAATTCTGTTGCAGATGCTAGGTGCCAACTCTGGGAGAACGACATGGAGATCAGAGAAATGAAAGATCAAGTCAAAGAACTTGTCGGTCTCTTACGGCAAAGCGAGATGAAGAGAAAAGAAGTTGAGAAGGAGCTAAAAGTGAGAGAGCAAGCTGTTGGAACCACATTGGCTACACCACCATCTGGAGACTCCCCAAATCCATCGAAACAATATGTCGAAGACATGAAGGGGCCCTTATCTCCAGTGTCTAAACAGCTAAAATACACGCCAGGGGTTGCCAATGGTTTGGTGAGGGAATCAGCAGCATTTGTAGATCAGGGTAGAAGGATGGTACCCATCGGACAGCTGTCAATGAAAAAACTAACAATTGTAGGACAAGCTTCTGGAAAGTTATGGAGGTGGAAAAGAAGTCATCATCAGTGGCTACTACAATTCAAGTGGAAGTGGCAGAAACCATGGAGACTTTCAGAATGGATAGGACACAGTGATGAGACAATCATGAGAACAAAACCACGCTCACAGCCTTTGCCACGTATCAGGTGA 3072 0.4329 MEAGEDCCVKVAVHVRPLIADEKLQGCKDCVTIVSGKPQVQIGAHSFTFDHVYGSTGSPSSSMFEECVAPLIDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGCQTGIVPQVMNVLFSKIGTLKHQIDFQLHVSFIEILKEEVRDLLDTSSMSKPETANGHAGKMTSPGKPPIQIRETSNGVITLAGSTEVSVATLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLNIPGDSCSNDTMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVINRDPMSNEMLKMRQQLEYLQAELCARAGASSEEVQVLKERITWLEAANEDLCRELHEYRSRCPIVEQSEREAYDGSTYIVKTDAVKRSLPITEAEYPMSETVGDSREMEEVAKEWEHTLLQNSMDRELHELNKRLQQKESEMKLFGISDAEVLKQHFGRKIMELEDEKRVVQRERDCLLAEVENLAANTDGQTQKLEDIHAQKLKTLEAQILDLKKKQESQVQLLKQKQKSDEAAKRLQDEIQCIKAQKVQLQQRIKQEAEQFRQWKASREKELLQLKKEGRRNEYERHKLQALNHRQKLVLQRKTEEAAMATKRLKELLEARKTSSRETLVTMNGSGANGQGNEKSLQRWLDHELEVMVKEHEVRFEYEKQSQVRAALAEELAMLKQVNEFAAKGLSPPRKNGFARASSMSPNARMAKIASLENMLSISSNSLVAMASQLSEAEERERAFSNRGRWNQLRSMGEAKNLLQYMFNSVADARCQLWENDMEIREMKDQVKELVGLLRQSEMKRKEVEKELKVREQAVGTTLATPPSGDSPNPSKQYVEDMKGPLSPVSKQLKYTPGVANGLVRESAAFVDQGRRMVPIGQLSMKKLTIVGQASGKLWRWKRSHHQWLLQFKWKWQKPWRLSEWIGHSDETIMRTKPRSQPLPRIR* 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0342 1023 ProSitePatterns Kinesin motor domain signature. 258 269 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gso6g0342 1023 Coils Coil 860 894 - -
Gso6g0342 1023 MobiDBLite consensus disorder prediction 897 911 - -
Gso6g0342 1023 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-LIKE PROTEIN 2 1022 - -
Gso6g0342 1023 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 2 1022 - -
Gso6g0342 1023 Coils Coil 523 557 - -
Gso6g0342 1023 MobiDBLite consensus disorder prediction 152 176 - -
Gso6g0342 1023 Pfam Kinesin motor domain 16 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso6g0342 1023 Coils Coil 590 638 - -
Gso6g0342 1023 CDD KISc_KIF4 7 364 - -
Gso6g0342 1023 SMART kinesin_4 6 371 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso6g0342 1023 Coils Coil 566 586 - -
Gso6g0342 1023 ProSiteProfiles Kinesin motor domain profile. 8 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso6g0342 1023 Gene3D Kinesin motor domain 2 391 IPR036961 -
Gso6g0342 1023 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso6g0342 1023 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso6g0342 1023 PRINTS Kinesin heavy chain signature 259 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso6g0342 1023 PRINTS Kinesin heavy chain signature 313 334 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso6g0342 1023 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 394 IPR027417 -
Gso6g0342 1023 Coils Coil 490 510 - -
Gso6g0342 1023 Coils Coil 671 691 - -
Gso6g0342 1023 MobiDBLite consensus disorder prediction 893 916 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0342 Gso-Chr6 3206323 3218743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0342 9 409 Calmodulin-binding Proteins AT5G65930 32.346 2.27e-52 198
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0361 4 3285433 3297355 Gso6g0342 6 3206323 3218743 GST
Gso14g0730 14 7522848 7535514 Gso6g0342 6 3206323 3218743 PCT
Gso17g2036 17 39850177 39866212 Gso6g0342 6 3206323 3218743 PCT
Gso6g0342 6 3206323 3218743 Gso14g0730 14 7522848 7535514 PCT
Gso6g0342 6 3206323 3218743 Gso17g2036 17 39850177 39866212 PCT