Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0341 ATGAGCCAGTGGATACACGTGGCGGTGGCAGCATCCGCCGTGGGATGCGTCTCGACCCTTTTGTTGGTCTTTCTCTGGCGTTGGTGCCATAAAAGAAATCATCGCAGAAATTTCGTTGAGCCGGCTAGTTTGACCAGAGTGGAGAGTGTCCAGGGAGGGATTTCTGTTTCCAGGCTTCATCAACAACAACAACCTTTTCAATTGGATCAGGGAAACAAGAACAACAACAAGGGCAATTACAATTACTATGTTTTTCGCGGTGGTGGCGTGTCGGGGAAAAGAAGTTTGTTCAATTGGGGTGATCATCCATCTATGGCCGCTGATGCTGTTGAAAATGGATGGTCACGATTTGCTTTCACAGGGTACAAGAGTTACACGCCATCTCCTTCGAAAAGATCAGCACTTTTAGGAGTTTGCGCTGCACCTGGTGGAGGAAGTGATTTTGGAAGAGAATCAGAGGTTGAGATAAGCTGGGAAGTGGCCCGTGGATCTGCTGAGTTTATGCAGAAGGTGAGGTTGAATCCCGGGATCAAAAAATCTCATCATCACAACAACAATAACAACGCTTTTTCTCTGAGTGTTGCTTCTATCATTAGAGGGGCTTTGCCTTTGCCTGGTCCTCCTTTGGGGAACTGTGCGTTCCCACAAGAGGCATATTTTGAGATTACCATTTTGTACTCACGTGGGGATGAGTATGAGTTTGTTGGGAAGAGTGTGGAAGGTGAAAAGACCAAGCTTTTGGTTCAAGGTAACTCCAATGTTAAAGGGAATTCGGAGGCTTTGGTTCATGTTACTAGTGGCAATGGTAGTAATAAAATCAACAATGTTGAAGGAGAAGGTGGGAAGGGTGAATCTGTGATGTTCTCTTTTGGGTTAACTGCTGGGGGTTCTGTTCCTTTGAGAGTTCCAGGTAGCTACACTGGGAGCATTGGCTTCAACTCCAACGGTTCTCTCTATCTTGATGGAATGAAACTTGTAAGCGAATCAGAGAAGGCAGAATGGGTAGGAACCGATAGAGTGATTGGTTGTGGATTTGATCCTAGGCAGAAGAAGGTTTTCTTCACATTAGACTCAGAGCTAATGCATGTCATTCACTGTCAGACAGAGGAATTTGGTACACCACTCTTTCCAATCTTGGCTGCAAACATAGACATTCTGGTGTTAGTTAATTTTGGACAAAGTGCATTTAAATATGCACCTGCAAATGCCCAGAGAACACCAAATCCATGCTTCATAGCCCCACTTGTAAATTCCCCTGCTGCTACCATAGGCTATGATGACAGCAAGGAGCTATTCTCAATTGGAAGGATTGATTCTCAGTGGCTCAATCGGTCCACAACCAAAGGAAGCCACAACAATGGGAACAATAATAATAACAATAACAACAAAAATCGAACATTGGATTTTGATGAGGAGTCTGAGGCTGATCTATTTGAAATCGTCTTAGATGGTTCTGGAAAATCGCCAAACACAGCATCATAG 1482 0.444 MSQWIHVAVAASAVGCVSTLLLVFLWRWCHKRNHRRNFVEPASLTRVESVQGGISVSRLHQQQQPFQLDQGNKNNNKGNYNYYVFRGGGVSGKRSLFNWGDHPSMAADAVENGWSRFAFTGYKSYTPSPSKRSALLGVCAAPGGGSDFGRESEVEISWEVARGSAEFMQKVRLNPGIKKSHHHNNNNNAFSLSVASIIRGALPLPGPPLGNCAFPQEAYFEITILYSRGDEYEFVGKSVEGEKTKLLVQGNSNVKGNSEALVHVTSGNGSNKINNVEGEGGKGESVMFSFGLTAGGSVPLRVPGSYTGSIGFNSNGSLYLDGMKLVSESEKAEWVGTDRVIGCGFDPRQKKVFFTLDSELMHVIHCQTEEFGTPLFPILAANIDILVLVNFGQSAFKYAPANAQRTPNPCFIAPLVNSPAATIGYDDSKELFSIGRIDSQWLNRSTTKGSHNNGNNNNNNNNKNRTLDFDEESEADLFEIVLDGSGKSPNTAS* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0341 493 MobiDBLite consensus disorder prediction 445 466 - -
Gso6g0341 493 SUPERFAMILY Concanavalin A-like lectins/glucanases 301 398 IPR013320 -
Gso6g0341 493 PANTHER RAN BINDING PROTEIN 9-RELATED 2 489 - -
Gso6g0341 493 Gene3D - 177 406 IPR043136 -
Gso6g0341 493 MobiDBLite consensus disorder prediction 445 464 - -
Gso6g0341 493 PANTHER SPLA/RYANODINE RECEPTOR (SPRY) DOMAIN PROTEIN 2 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0341 Gso-Chr6 3188009 3190848 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0728 14 7485984 7492358 Gso6g0341 6 3188009 3190848 PCT
Gso17g2038 17 39892635 39895705 Gso6g0341 6 3188009 3190848 PCT
Gso6g0341 6 3188009 3190848 Gso14g0728 14 7485984 7492358 PCT
Gso6g0341 6 3188009 3190848 Gso17g2038 17 39892635 39895705 PCT