Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0319 ATGCAAGCGGTGGGTAGAATAATTAGTCAGGGCGTGGTCAGGTTTTCAGGGCCGTTTCATCCGTTTGGTGGCGCCGTTGATATTGTGGTGGTGGAACAGAAAGATGGTACTTTCAAGTCCTCTCCTTGGTACGTTCGATTCGGCAAATTCCAAGGGGTTTTGAAGGCAAGGGAAAAGGTTGTTGATATCTGTGTCAATGGGGTTCAAGCTGACTTCCAAATGCATCTTGATCATACAGGGGAAGCCTTTTTTCTCAGGGAAATCGATGCACAAGGACAAGAAGAAGAAGATGCTATTTTGATGTTTCCGTCTTCTTCCGCTGATGATGAGGCAGATGATCACTCTCGCTCTCACTCTCTCAGGTCCAAGAGTTTGAATTATGATGCTGCAGCTGCTGCTGAGGTTGTGGGAAGGACTACTAGTTCTCGCCGCTCCCGGATACTTGGCCTTGTCTTTGGGAGAAGGTCTTTGAAGAGGGAAGATGGTGGGGCTGTTGGTGATGGTGATGGAACTGAGAACAGGGTTGGTTCCTTGGAGCGGGCCCAGATTGCGGCTAACTTGTTAGACATCAAGTGGTCCACCAATCTCTCCGCGGAACAAGGGCAAGATGCTCTTGCTAACCCGTCTGGGGATGGTGAGGTGGTTGTGGAGAATGGTGAATTGAATGAGGAATCTTGTTTTGATGGTGAGTGTGACTTGAATGGGAAGGAAGTCATGTATGATACTGCAGGGTCTGATGTGCAAGTTGCATGTGTGGAGATGGAGGTTGAGGCATGCGTAGAAAAGGGATTGAATGGAGAAGAGCTTTCTATTGATGCGCCGGGTAAAAATAGTAATGAAACATCATCAGAGACTTCCAAGTTGGGCGTGGATTGTTCTAGTGAACAAGCTCACGGGGAAGTTAATGTCCATGTCCACGATGATGAAGTCTTGCATGGTTCTGCAACTGTACTGCTAGCTGAGGATACAGAAGCTGAGGAAGTTATTGAGAATGCTGCTCTTGAGTTTTATTCTCGGGTTCAGCAAACAGCTAGTTCAGATTCTGATGATGTTAGGTACAATGAGGTGGTTGTTGAAGAGCAACCAACATCTCCAAAACCTCAAACTGTCAAAATGGGCCTAGGACATTATTCAAATGAGAAAAAAGTTGAGCCAAATTGTGTTATCAAAAATGTCTCTAGCACACTATCATCTCCAAGTAAAGCATCAAGGAGATCATCATCACCAAGTTCAGAGGACGAAAATTTCCTTTTTAGTGACCTTGACAAAAGTGTAATCAATGATCGATTCGAGAGATCATTCTCCCCTGAACATGTAGATAAAGAAGATCATGTTTCTTATGGGAATGACACTGAAAAGTTAACAGCAATATCCAATCCCATAGTCATTCCCAGAACCATAGCTGCGGTGGAGGAAGTTGTGCAGCTTTCGGGATCCTTGCCAAATATTTCTTCTGGTAGTGACATCATGGTCGAATACGATGTTCATTATCCTTTGAGTCAATCACTGGACTCAAATTCCACATCCTTGCCATGGGCATTTCCTGGAAAAGATGACTTGGAATGTCTAAAATCAGATGAAGACAAAAGAAACCAGTTACCACATGAGGAGCAAGGTGCTAAGGATTACAATGATTCTGGGGAATTCAAAGGAGATCCATCAACACACAACCCTTCCCCTGGTGGAAGTTGGAGAATTTGGCCTTTCTCCTTGAGGAGAGCAGGATCTAGCAAGTCTATGTTGCCGCCTTCTCCAAGTAATGCCAACAACGCTACTTTTGTTAATTCTCCAGAGAATACGACTAGTACTGATATGAACAAAAATGAGCTCAAACCCAATTTAATGAAAAAGAAGGTTAAGGAAATGACTCCAACCTCTGAACAGCTAGCCTCATTGAATCTGAAGGATGGGATGAATACTGTAACCTTCACCTTCTCTACAGCTGTGCTGGGGAAGCAGCAGGTTGACTGTCGAATCTATTTGTGGAAATGGAACACTCGTATAGTGATCTCAGATGTGGATGGTACAATTACAAGGTCAGATGTTCTTGGTCAGTTCATGCCTTTGGTTGGTATTGACTGGTCACAGACAGGTGTTGCACATTTATTCTCCGCAATCAAGGAAAATGGTTACCAACTGCTTTTTCTCAGTGCTCGTTCAATTTCTCAGGCCTATATTACACGGCAATTCTTAGTTAACCTTAAACAGGATGGAAAAGTTTTACCAGATGGTCCTGTTGTTATTTCCCCTGATGGACTTTTTCCCTCTCTATATCGAGAAGTTATTAGGAGGGTTCCTCATGAATTCAAAATTGCATGCTTAGAGGACATCAAGGCACTTTTTCCTTCTGATAGCAGTCCATTCTATGCTGGTTTTGGTAATAGGGATACTGATGAAATCAGCTACCTTAAGGTTGGAATTCCCCTAGGAAAAATCTTCATTATTAATCCCAGGGGAGAGGTGGTTGTAAACCGTCGTGTTGACACAAAATCATATACTTCTCTGCATGCTCTCGTGAATGGAATGTTCCCCCCTACTAGCTCTTCTGAGCAGGAGGACTTTAACTCATGGAATTTCTGGAAACTACCCCCTCCTGCCATGGATATTTGA 2610 0.4375 MQAVGRIISQGVVRFSGPFHPFGGAVDIVVVEQKDGTFKSSPWYVRFGKFQGVLKAREKVVDICVNGVQADFQMHLDHTGEAFFLREIDAQGQEEEDAILMFPSSSADDEADDHSRSHSLRSKSLNYDAAAAAEVVGRTTSSRRSRILGLVFGRRSLKREDGGAVGDGDGTENRVGSLERAQIAANLLDIKWSTNLSAEQGQDALANPSGDGEVVVENGELNEESCFDGECDLNGKEVMYDTAGSDVQVACVEMEVEACVEKGLNGEELSIDAPGKNSNETSSETSKLGVDCSSEQAHGEVNVHVHDDEVLHGSATVLLAEDTEAEEVIENAALEFYSRVQQTASSDSDDVRYNEVVVEEQPTSPKPQTVKMGLGHYSNEKKVEPNCVIKNVSSTLSSPSKASRRSSSPSSEDENFLFSDLDKSVINDRFERSFSPEHVDKEDHVSYGNDTEKLTAISNPIVIPRTIAAVEEVVQLSGSLPNISSGSDIMVEYDVHYPLSQSLDSNSTSLPWAFPGKDDLECLKSDEDKRNQLPHEEQGAKDYNDSGEFKGDPSTHNPSPGGSWRIWPFSLRRAGSSKSMLPPSPSNANNATFVNSPENTTSTDMNKNELKPNLMKKKVKEMTPTSEQLASLNLKDGMNTVTFTFSTAVLGKQQVDCRIYLWKWNTRIVISDVDGTITRSDVLGQFMPLVGIDWSQTGVAHLFSAIKENGYQLLFLSARSISQAYITRQFLVNLKQDGKVLPDGPVVISPDGLFPSLYREVIRRVPHEFKIACLEDIKALFPSDSSPFYAGFGNRDTDEISYLKVGIPLGKIFIINPRGEVVVNRRVDTKSYTSLHALVNGMFPPTSSSEQEDFNSWNFWKLPPPAMDI* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0319 869 MobiDBLite consensus disorder prediction 577 608 - -
Gso6g0319 869 SMART lns2 668 824 IPR031315 -
Gso6g0319 869 MobiDBLite consensus disorder prediction 394 415 - -
Gso6g0319 869 PANTHER LIPIN 1 868 IPR026058 -
Gso6g0319 869 Pfam lipin, N-terminal conserved region 1 99 IPR007651 -
Gso6g0319 869 MobiDBLite consensus disorder prediction 527 608 - -
Gso6g0319 869 MobiDBLite consensus disorder prediction 527 549 - -
Gso6g0319 869 PANTHER GH19076P 1 868 - -
Gso6g0319 869 Pfam LNS2 (Lipin/Ned1/Smp2) 620 844 IPR013209 -
Gso6g0319 869 SUPERFAMILY HAD-like 660 812 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0319 Gso-Chr6 2961772 2970006 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0335 4 3019789 3028959 Gso6g0319 6 2961772 2970006 GST
Gso17g2060 17 40224968 40230591 Gso6g0319 6 2961772 2970006 PCT
Gso6g0319 6 2961772 2970006 Gso17g2060 17 40224968 40230591 PCT