Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0310 ATGGAGAGAACATTGTCATCCCTTCTACAGATTCAGCCTCCAACCTATGGAAATTTAGTCACTATTCTCAGCATCGACGGAGGTGGTATCAGGGGCATTATCCCCGCAACTATTCTTGCTTTCCTTGAAGCCCAACTTCAGGAGTTGGACGGTGAGGATGCAAGGCTTGCAGACTATTTTGATGTGATTGCTGGAACAAGCACAGGTGGTATTGTAACAGCTATGCTAAGTGCTCCAAATGATAATCAGCGTCCTCTATTTGCAGCCAAGGATATCAAGCCCTTTTACTTGGAACATTGCCCAAAGATTTTCCCACAACACAGTGGCTTGTGGGGATCGGTAGGAAAGTTGCTGGGATCGTTGGGAGGACCAAAATACGATGGAAAATACCTTAAAGAAGTGGTGAGAGAGAAACTAGGGCAGACACGTTTGCATGAAACGCTGACGAATATAGTGATTCCCACGTTTGACATAAAGACATTGCAACCAATCATTTTCTCCTCTTACCAAATCAAGAGGTCTCCTTGCTTGGATGCTCGACTCTCTGACATATGCATCAGCACTTCTGCCGCACCTACTTATCTTCCAGCCTACCACTTCAAGAACCAAGATTCACAAGGAAACACGCACGAATTCAACCTTATTGATGGTGGCGTTTGTGCTAATAATCCGACTTTAGTGGCGATGAATCAAGTAACAAAGCAGATAATTAATGAAAATCCGGACTTCTTTTCCATCAAGCCAATGGAATATGGTCGTTTCCTGATAATCTCTCTAGGCACTGGAACCCCTAAGAATGAACAGAAATTCAATGCACAAATGGCAGCAAAATGGGGTCTGTTGGATTGGTTAACCAATTCTGGTTCTACTCCCTTAATCGATGTGTTTACTCAGTCCAGCGCAGATATGGTTGATTTTCATCTTGCTACCGTCACTCAAGCACTGCATTCAGAAAATAATTACCTTCGGATACAGGATGATACATTGACCGGTACAGACTCTTCAGTTGATATTGCCACAAAAGAGAATTTGGAAAAACTTAGCCAAATTGGTGAGAGGTTGTTGAAGAAACCAGTATCTCAGATCAATTTGGAGGATGGTCTGTTTGAATCGGTAGGAAATGGGGAGACCAATGAAAATGCTCTCAAAAGGTTTGCGAAAATACTTTCGCAAGAGAGGAGGCTCCGAGAATCAAAATCCCCTCACACTAAGAAGGTCCCAAGCTACTTTGCTCGTGAATTCTGA 1245 0.4321 MERTLSSLLQIQPPTYGNLVTILSIDGGGIRGIIPATILAFLEAQLQELDGEDARLADYFDVIAGTSTGGIVTAMLSAPNDNQRPLFAAKDIKPFYLEHCPKIFPQHSGLWGSVGKLLGSLGGPKYDGKYLKEVVREKLGQTRLHETLTNIVIPTFDIKTLQPIIFSSYQIKRSPCLDARLSDICISTSAAPTYLPAYHFKNQDSQGNTHEFNLIDGGVCANNPTLVAMNQVTKQIINENPDFFSIKPMEYGRFLIISLGTGTPKNEQKFNAQMAAKWGLLDWLTNSGSTPLIDVFTQSSADMVDFHLATVTQALHSENNYLRIQDDTLTGTDSSVDIATKENLEKLSQIGERLLKKPVSQINLEDGLFESVGNGETNENALKRFAKILSQERRLRESKSPHTKKVPSYFAREF* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0310 414 PANTHER PATATIN 1 405 - -
Gso6g0310 414 SUPERFAMILY FabD/lysophospholipase-like 18 366 IPR016035 -
Gso6g0310 414 Gene3D Cytosolic phospholipase A2 catalytic domain 10 402 - -
Gso6g0310 414 MobiDBLite consensus disorder prediction 395 414 - -
Gso6g0310 414 PANTHER XYLOSE ISOMERASE 1 405 - -
Gso6g0310 414 CDD Pat17_isozyme_like 17 367 - -
Gso6g0310 414 Pfam Patatin-like phospholipase 23 229 IPR002641 GO:0006629
Gso6g0310 414 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 23 229 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0310 Gso-Chr6 2896094 2899503 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0310 11 404 Miscellaneous Gene Families AT2G26560 64.721 0.0 531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0326 4 2956720 2960181 Gso6g0310 6 2896094 2899503 GST
Gso17g2069 17 40306259 40310393 Gso6g0310 6 2896094 2899503 PCT
Gso6g0310 6 2896094 2899503 Gso17g2069 17 40306259 40310393 PCT