Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0286 ATGAAATTCAAGTCAAGAAGACCACAACCACGAGCACTAGTAGCATTCTTTCTCATTCTGTCCATCTTCTCACTACCGGCTTCATCATCATCATCTTCTTCTTCTTCCATTGATGACGTGAAATCAAGCACCATCATTCATCAATTCAAGGAAGCCCCCGAATTCTACAACTCCCCAGAATGCGCCTCCCTCACCGACAACGAGGAAGACAGTAGCGACAGGTACATATGTTCGGAGGAAGCGGTACACGTGGCAATGACGCTGGACACTACATACATCCGAGGATCCATGGCGGCGATCCTCTCGGTCCTCCAACACTCCTCGTGCCCGCAGAACACATTCTTCCACTTCGTCTGCTCCTCGAGCGCGTCCCTCCTACGCGCCGCGATCTCCCACTCGTTCCCTTACCTGAACTTCCAGCTATACACCTTCGACGACTCCCAGGTCTCGGGACTCATCTCAAGCTCAATCCGCTCCGCACTGGATTGCCCCTTAAACTACGCGCGCTCCTACTTGGCCAACCTCTTGCCCATCTGCGTGAGGCGCGTGGTGTACTTGGACTCCGATCTCATCCTCGTCGACGACATTGCCAAGCTGGCAGCAACACCATTGGGCGAAAACAAGGTCCTGGCTGCCCCCGAATACTGCAACGCCAATTTCACCTCGTACTTCACCCCAACGTTCTGGTCCAACCCTTCGCTGTCTCTCACGTTCGCGGATAGGAGGCCGTGCTACTTCAACACGGGGGTCATGGTCATCGATTTGGAGCGGTGGCGGGAGGGGGATTACACGACAAAAATTGAAGAGTGGATGGAGCTGCAGAAGAGGATGAGGATCTATGACTTGGGTTCCTTGCCGCCGTTTTTGCTTGTCTTTGCTGGGAACATTGCTTCCGTTGATCATAGGTGGAACCAGCACGGCCTCGGTGGGGACAACTTTCGTGGGCTTTGCAGAGATCTGCACCCTGGTCCTGTTAGTCTCTTGCATTGGAGTGGGAAAGGTAAACCGTGGGTTCGATTGGACGCTAATAGGCCTTGTCCTTTGGATGCGCTTTGGGCACCTTATGATCTATTGAACACTCCCTTTTCTTTGGATTCTTGA 1101 0.5304 MKFKSRRPQPRALVAFFLILSIFSLPASSSSSSSSSIDDVKSSTIIHQFKEAPEFYNSPECASLTDNEEDSSDRYICSEEAVHVAMTLDTTYIRGSMAAILSVLQHSSCPQNTFFHFVCSSSASLLRAAISHSFPYLNFQLYTFDDSQVSGLISSSIRSALDCPLNYARSYLANLLPICVRRVVYLDSDLILVDDIAKLAATPLGENKVLAAPEYCNANFTSYFTPTFWSNPSLSLTFADRRPCYFNTGVMVIDLERWREGDYTTKIEEWMELQKRMRIYDLGSLPPFLLVFAGNIASVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLNTPFSLDS* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0286 366 SUPERFAMILY Nucleotide-diphospho-sugar transferases 82 357 IPR029044 -
Gso6g0286 366 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 83 346 IPR029044 -
Gso6g0286 366 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 12 366 - -
Gso6g0286 366 Pfam Glycosyl transferase family 8 83 339 IPR002495 GO:0016757
Gso6g0286 366 PANTHER HEXOSYLTRANSFERASE 12 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0286 Gso-Chr6 2680518 2682340 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0304 4 2748197 2749876 Gso6g0286 6 2680518 2682340 GST
Gso14g0658 14 6547740 6549559 Gso6g0286 6 2680518 2682340 PCT
Gso17g2097 17 40683920 40685658 Gso6g0286 6 2680518 2682340 PCT
Gso6g0286 6 2680518 2682340 Gso14g0658 14 6547740 6549559 PCT
Gso6g0286 6 2680518 2682340 Gso17g2097 17 40683920 40685658 PCT