Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0284 ATGGAGCTAACGGTTCGGTGCACCTCATGCGCGCTGTCCAGATTTCATTGCAAGCTTCGATTCGCTGTGATTGTTTTCGAGATTATATTGATATTGGCATGGGTGGAGGCCCACAATGCGAAGTCCCATGAACACCAACTTCAATTGGGAGGCTTGGAGAGGAATACCGAGAACATTGCCTCACACTCTTGCATACATGACCAGATTCTTGAACAGAGGAAGCGACCTGGTCGCAAGGTGTATTCAATTACCCCACAGGTTTATGAGCCTGGTCGCTTGAAACCCCCTCAGCATAAAGGTAGGACATTACTTGATGTGTCAACATCATCAAGGCCTCAAGAGGATGCAAAGAAGCCTATTAGGATATATCTAAATTATGATGCTGTTGGCCACTCCCCTGACAGGGATTGTCGAGCAATTGGCGATATTGTCAAACTTGGGGAGCCTCCCATGACTTCTCCTGGTTTTCCTTCTTGCGATCCTCATGCTATTCCTCCAATCTTTGGTGATTGTTGGTATAACTGCACTTCTGAAGATATCTCAGAAGATGACAAAAAATGTCGCCTTCGTAAGGCATTAGGTCAGACAGCTGACTGGTTTAGGAGAGCATTGGCTGTTGAGCCTGTCAAGGGGAACCTGCGGTTGAGTGGATATTCTGCGTGTGGACAAGATGGAGGTGTGCAGCTTCCTCGTGGATATATTGAGGAGGGTGTATCTGATGCCGACTTGGTTCTTTTGGTGACTACAAGACCTACAACTGGAAATACACTTGCCTGGGCAGTGGCATGTGAACGAGATCAATGGGGTCGTGCTATAGCTGGACATGTTAATGTTGCGCCTCGCCATTTGACTGCCGAGGCAGAGACTTTGCTTTCAGCTACTCTGATACATGAGGTTATGCATGTTCTTGGTTTTGATCCACATGCCTTTGCTCATTTTAGAGATGAAAGGAAAAGACGGCGTAATCAGGTTACTGAACAAGTTATGGATGAAAAACTTGGACGAATGGCAACACGTGTGGTGCTTCCTCGTGTTGTCATGCATTCTCGATATCATTATGCGGCTTTCTCAGGAAATTTTTCTGGTTTAGAGCTGGAAGATGGTGGAGGACGTGGCACATCAGGATCTCACTGGGAAAAAAGGCTTCTTATGAATGAGATTATGACTGGTTCTGTGGATACAAGATCTGTTGTTTCAAAAATGACATTAGCTCTATTAGAAGATAGTGGGTGGTACAAGGCCAATTATAGTATGGCAGACCATCTTGATTGGGGTCGCAACCAAGGTACTGAGTTTGTTACCTCTCCTTGCAATCTATGGGAGGGAGCCTATCGTTGCAACACAACACAGTTTTCTGGCTGTACGTATAACAGGGAGGCAGAGGGATACTGCCCCATCCTAACTTATAGTGGAGATCTCCCTCGGTGGGCTCGGTATTTTCCTCAAGCTAATAAGGGTTTATGTTGTCTTTGGCCAGATTTTTCACTATTGGTGCTGGATTGTCAAGAAACTGTTAAACCTTTTAGGCTATTGCATTCTGGTGGACAATCCTCGTTGGCTGATTATTGCACTTATTTTGTTGCTTACTCTGATGGATCATGTACAGACACTAACAGTGCACGAGCACCTGACAGAATGCTAGGTGAAGTCAGAGGAAGTAACTCTAGGTGTATGGCTTCATCACTAGTACGCACAGGCTTTGTACGAGGTTCTATGACCCAGGGAAATGGTTGCTATCAGCACAGGTGTATCAACAATTCTTTAGAGGTTGCTGTGGATGGTATCTGGAAAGTGTGTCCTCAAGCTGGTGGACCCATTCAGTTCCCTGGCTTTAATGGTGAATTACTCTGCCCTGCTTACCATGAGCTCTGTAACACTGACCCAGTAGCTGTGTCTGGTCAATGCCCTAATTCATGTAATTTCAATGGAGATTGTGTTGATGGAAAATGCCGATGCTTTCTTGGATTTCATGGGAATGATTGCAGTAGACGTTCCTGCCCCAGCAAATGCAATGGCAATGGAATGTGTCTTTCCAATGGGATTTGTGAATGTAAACCTGGCTACACTGGCATTGACTGCTCCACTGCTGTGTGTGATGAGCAATGCAGCCTTCATGGTGGGGTTTGTGATAATGGAGTTTGTGAATTTCGCTGTTCTGACTATGCGGGATACACATGCCAGAATAGCTCCATGCTCCTATCTAGCCTTTCGGTGTGCAAAAATGTGCTGGGAAATGATGTTTCTGGACAGCATTGTGCACCCAGTGAGCCTAGCATACTACAGCAACTGGAAGAGGTTGTTGTCATACCCAACTACCACCGACTATTCCCTGGTGGTGCTAGAAAATTATTTAATATATTTGGCAGCTCCTACTGTGATGAGACTGCTAAACGGCTTGCCTGCTGGATCTCAATCCAGAAGTGCGACAAGGATGGAGACAACAGGCTTCGAGTGTGCCATTCTGCATGCCAGTCTTATAATCTAGCATGTGGAGCTTCACTTGACTGCTCTGATCAGACGCTTTTCAGCAGTGACGGGGAAGGGGAGGGTCAATGCACTGGCTCGGGTGAGATGAAATTGTCATGGTTTAATCGTCTGCGAAGCAGTTTTTCTTTGAGAAATAGTTCCTTGAAAGGAATATCTGTAAAATATAGGCAGCTATAA 2664 0.4565 MELTVRCTSCALSRFHCKLRFAVIVFEIILILAWVEAHNAKSHEHQLQLGGLERNTENIASHSCIHDQILEQRKRPGRKVYSITPQVYEPGRLKPPQHKGRTLLDVSTSSRPQEDAKKPIRIYLNYDAVGHSPDRDCRAIGDIVKLGEPPMTSPGFPSCDPHAIPPIFGDCWYNCTSEDISEDDKKCRLRKALGQTADWFRRALAVEPVKGNLRLSGYSACGQDGGVQLPRGYIEEGVSDADLVLLVTTRPTTGNTLAWAVACERDQWGRAIAGHVNVAPRHLTAEAETLLSATLIHEVMHVLGFDPHAFAHFRDERKRRRNQVTEQVMDEKLGRMATRVVLPRVVMHSRYHYAAFSGNFSGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKANYSMADHLDWGRNQGTEFVTSPCNLWEGAYRCNTTQFSGCTYNREAEGYCPILTYSGDLPRWARYFPQANKGLCCLWPDFSLLVLDCQETVKPFRLLHSGGQSSLADYCTYFVAYSDGSCTDTNSARAPDRMLGEVRGSNSRCMASSLVRTGFVRGSMTQGNGCYQHRCINNSLEVAVDGIWKVCPQAGGPIQFPGFNGELLCPAYHELCNTDPVAVSGQCPNSCNFNGDCVDGKCRCFLGFHGNDCSRRSCPSKCNGNGMCLSNGICECKPGYTGIDCSTAVCDEQCSLHGGVCDNGVCEFRCSDYAGYTCQNSSMLLSSLSVCKNVLGNDVSGQHCAPSEPSILQQLEEVVVIPNYHRLFPGGARKLFNIFGSSYCDETAKRLACWISIQKCDKDGDNRLRVCHSACQSYNLACGASLDCSDQTLFSSDGEGEGQCTGSGEMKLSWFNRLRSSFSLRNSSLKGISVKYRQL* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0284 887 Gene3D Leishmanolysin domain 4 529 622 - -
Gso6g0284 887 ProSiteProfiles EGF-like domain profile. 662 694 IPR000742 -
Gso6g0284 887 PANTHER METALLOENDOPEPTIDASE/ZINC ION-BINDING PROTEIN 1 859 - -
Gso6g0284 887 Gene3D Laminin 666 696 - -
Gso6g0284 887 Pfam Leishmanolysin 173 626 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Gso6g0284 887 Gene3D - 623 665 - -
Gso6g0284 887 Gene3D Leishmanolysin domain 3 440 527 - -
Gso6g0284 887 Pfam EGF-like domain 666 693 IPR013111 -
Gso6g0284 887 SMART egf_5 665 694 IPR000742 -
Gso6g0284 887 SMART egf_5 634 662 IPR000742 -
Gso6g0284 887 Gene3D Leishmanolysin , domain 2 312 437 - -
Gso6g0284 887 MobiDBLite consensus disorder prediction 91 110 - -
Gso6g0284 887 PANTHER LEISHMANOLYSIN-LIKE PEPTIDASE 1 859 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Gso6g0284 887 PRINTS Leishmanolysin (M8) metalloprotease family signature 247 276 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Gso6g0284 887 PRINTS Leishmanolysin (M8) metalloprotease family signature 400 429 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Gso6g0284 887 ProSitePatterns EGF-like domain signature 2. 682 693 IPR000742 -
Gso6g0284 887 Gene3D - 113 302 - -
Gso6g0284 887 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 115 631 - -
Gso6g0284 887 ProSitePatterns EGF-like domain signature 1. 682 693 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0284 Gso-Chr6 2656607 2665699 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0300 4 2720585 2728361 Gso6g0284 6 2656607 2665699 GST
Gso14g0654 14 6498380 6506684 Gso6g0284 6 2656607 2665699 PCT
Gso17g2100 17 40712498 40720580 Gso6g0284 6 2656607 2665699 PCT
Gso6g0284 6 2656607 2665699 Gso14g0654 14 6498380 6506684 PCT
Gso6g0284 6 2656607 2665699 Gso17g2100 17 40712498 40720580 PCT