Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0260 ATGGCCTCAAGTCAGGGTTGGACTCCGAAGCAGAACAAGAGATTTGAGAATGCCCTTGCCATCTTCGACAAGGACACCCCAGACAGGTGGCACACGGTGGCCAGGGCCGTCGGAGGAAAAACGGTGGAGGAAGTGAAAAGGCATTATGAGAAGCTCGTGGAAGATGTGAAGGAGATTGAGGAAGGTCACGTGCCCCTCCCCAATTACCGAAGTGCTGCAAGAGGCCACGGTTACATGGATGAAGAAAACAGGATGAAGGTTCTGAGTCTGCAGTGA 276 0.529 MASSQGWTPKQNKRFENALAIFDKDTPDRWHTVARAVGGKTVEEVKRHYEKLVEDVKEIEEGHVPLPNYRSAARGHGYMDEENRMKVLSLQ* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0260 91 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 91 - -
Gso6g0260 91 CDD SANT 7 53 IPR001005 -
Gso6g0260 91 Gene3D - 1 66 - -
Gso6g0260 91 ProSiteProfiles Myb-like domain profile. 7 53 IPR001005 -
Gso6g0260 91 SUPERFAMILY Homeodomain-like 5 60 IPR009057 -
Gso6g0260 91 SMART sant 3 55 IPR001005 -
Gso6g0260 91 Coils Coil 42 62 - -
Gso6g0260 91 ProSiteProfiles SANT domain profile. 2 57 IPR017884 -
Gso6g0260 91 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 91 IPR044636 GO:0003700
Gso6g0260 91 Pfam Myb-like DNA-binding domain 6 52 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0260 Gso-Chr6 2454523 2455292 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gso6g0260 Myb_DNA-binding 3.3e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0281 4 2525315 2526039 Gso6g0260 6 2454523 2455292 GST
Gso14g0634 14 6219881 6220882 Gso6g0260 6 2454523 2455292 PCT
Gso6g0260 6 2454523 2455292 Gso14g0634 14 6219881 6220882 PCT