Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0247 ATGATGATGAAGCGTCGGTTCCTTTTGGTTCTCTTGGTTCTCTATGTCACAGTGGAGCAGAGTAAGCTACTCCACCACGTAGAAGCCGATGGTGGGTTTGTAAAAACAAGAGGAGTGCAGCTTATGCTGAATGGGAGTCCCTACTATGCTAATGGCTTTAATGCCTATTGGCTTATGTACCTTGCCTCTGATCCTTCCCAGAGAAACAAAATCTCATCGGTATTTCAACAGGCTTCAAATCATGGACTCAACATTGCCAGAACTTGGGCCTTCAGTGATGGTGGATATCAACCCCTACAATACTCTCCTGGATCCTACAATGACCAAATGTTTCAGGGCTTGGATTTCGCAATAGCCGAAGCAAGAAAATATGGGATCAAGATGGTGTTGAGTTTGGTGAATAACTATGAGAACATGGGTGGAAAGAAACAGTATGTGGAATGGGCAAGGAGTCAGGGACAGTCCATAAATTCTGAGGATGACTTTTTTACAAATCCTGTGGTGAAGGGATACTACAAAAACCACATCAAGGCTGTACTTACAAGACGTAATAGCATCACTGGAGTTGCTTACAAAGACGACCCAACTATAATGGCTTGGGAACTTATGAATGAGATTAGGTGCCCTTCTGATCAATCAGGAAGGACAGTTCAGGCTTGGATCACTGAGATGGCATCTTACCTGAAATCCATAGATGGAAACCACTTGCTGGAAGCTGGTCTAGAGGGTTTCTACGGCCAGTCAAAACCTGAGTCTAACCCTAACTTCAATGTAGGAACCGATTTCATTGCAAACAACCAAATCCCAGGGATTGATTTCGCAACAGTGCATTCCTACCCCGACCAATGGATATCAAGTTCAGGTTATGAGGACCAAATCTCATTCTTAGGCCGGTGGCTGAATGAGCACATCCAAGATGCACAGAACACCCTTCACAAGCCACTTCTATTTGCGGAGTTTGGTATTTCCACAAAGAGTTATGGTGGCAACTCAACACCAAGGGATCGGTTATTCAACACGGTATATTCAGCAATATACTCATCAGCAAGCAGTGGCGGGGCTGCTGTTGGTGGCCTGTTTTGGCAACTTATGGCTCAAGGAATGGATTCTTATCGAGACGGTTACGAGGTGGTCTTAGATGAGAGCCCTTCAACGGCTAATTTGATTGCTCAAGAGTCTCAAAAACTAAACCGAATTCGCAAGATGTACGCCAGACTCAGAAACATTGAGAAATGGAATGAAGCTAAGCAAATTAGAGGATGA 1263 0.4434 MMMKRRFLLVLLVLYVTVEQSKLLHHVEADGGFVKTRGVQLMLNGSPYYANGFNAYWLMYLASDPSQRNKISSVFQQASNHGLNIARTWAFSDGGYQPLQYSPGSYNDQMFQGLDFAIAEARKYGIKMVLSLVNNYENMGGKKQYVEWARSQGQSINSEDDFFTNPVVKGYYKNHIKAVLTRRNSITGVAYKDDPTIMAWELMNEIRCPSDQSGRTVQAWITEMASYLKSIDGNHLLEAGLEGFYGQSKPESNPNFNVGTDFIANNQIPGIDFATVHSYPDQWISSSGYEDQISFLGRWLNEHIQDAQNTLHKPLLFAEFGISTKSYGGNSTPRDRLFNTVYSAIYSSASSGGAAVGGLFWQLMAQGMDSYRDGYEVVLDESPSTANLIAQESQKLNRIRKMYARLRNIEKWNEAKQIRG* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0247 420 Coils Coil 389 409 - -
Gso6g0247 420 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE-LIKE PROTEIN 6 419 - -
Gso6g0247 420 Gene3D Glycosidases 29 400 - -
Gso6g0247 420 Pfam Cellulase (glycosyl hydrolase family 5) 66 332 IPR001547 GO:0004553|GO:0071704
Gso6g0247 420 PANTHER - 6 419 IPR045053 GO:0004553
Gso6g0247 420 SUPERFAMILY (Trans)glycosidases 33 388 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0247 Gso-Chr6 2386971 2391314 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0268 4 2454216 2458679 Gso6g0247 6 2386971 2391314 GST
Gso14g0620 14 6089080 6094232 Gso6g0247 6 2386971 2391314 PCT
Gso17g2133 17 41024122 41028068 Gso6g0247 6 2386971 2391314 PCT
Gso6g0247 6 2386971 2391314 Gso14g0620 14 6089080 6094232 PCT
Gso6g0247 6 2386971 2391314 Gso17g2133 17 41024122 41028068 PCT