Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0203 ATGGATCGACGGTGGCCTTGGAAGAAAAAATCATCAGAAAAGTCCGTGATTGAGAAAGCAACTACTGCATTGGATTCCTCCGATGCTTCCAACAACCAGGATAACAACAAGAAACCAAACTATGTTCAAATCTCTGTGGAATCCTATTCACATCTGTCTGACTTGGAAGATCAAGTGAAGACATATGAGGAAAAAGTTCAGACACTTGAAGATGAGATCAAGGAAATGAATGAAAAGATGTCTGCAGCAAACTCTGAGATCAATACCAAGGAAAGCATGGTAAAACAACATGCTAAAGTGGCTGAAGAAGCTGTATCAGGCTGGGAAAAGGCTGAAGCTGAAGCTTTGGCATTGAAGAACCATCTAGAATCTGTCACTCTTTTAAAACTCACTGCTGAGGATCGCGCAACGCATTTAGATGGTGCTCTTAAAGAGTGTATGCGACAAATACGAAACCTGAAGGAAGAACATGAGCATAAAATACAGGAAGTTGCTCTCTCAAAAACCATGCAATTAGACAAGATTAAGGGGGAGCTGGAGGCAAAGATAGTGAACTTTGAACAGGAACTTCTTAGGTCTGCTGCTGAAAATGGGACTCTGTCAAGGTCATTGCAGGAACGCTCGAACATGCTAATCAAATTAAGCGAAGAGAAGGGTCATGCCGAGGGTGAAATTGAGCTTCTTAAGGGCAACATAGAAGCATGTGAAAGGGAAATTAATTCACTTAAATATGAACTTCATGTTGTTTCTAAAGAGCTTGAAATTCGCAATGAAGAAAAAAATATGAGTATGAGGTCTGCTGAAGCTGCTAACAAGCAGCATATGGAGGGTGTAAAAAAAATTACCAAGTTAGAGGCTGAGTGCCAAAGATTACGTGGTCTTGTGAGGAAAAAGTTACCTGGTCCTGCTGCACTTGCACAGATGAAGCTAGAAGTCGAAAGCCTTGGCCGAGATTTTGGAGAAAGTCGATTAAGGAAGTCCCCTGTGAAGCCTGCTACCCCTAATTTGTCTCCATTACCTGATTTCTCCCTGGAGAATGTACAGAAATTCCAGAAGGACAATGAATTTCTTACGGAGCGTTTATTAGCAATGGAAGAAGAAACGAAGATGCTGAAAGAAGCTTTGGCTAAACGTAACAGTGAGTTGCAGGCCTCAAGGAGTATGTGTGCTAAAACACTGAGCAAACTTCAAAGTTTGGAAGCACAATCTCAGAACCAGCTGAAAGGATCTCCAAAATCCATCGTCCAGTTAACTCACGAACGTATTTATAATCAAAATTCAAGCAGTGCACCAAGTTTGATCTCCATGTCTGAAGATGGAAATGACGATGCAGAAAGTTGTGCTGAATCTTGGGCAACAGCAATAGTCTCTGGGCTATCCCAATTTCCTAGAGAAAAGTGCAATGAGGAATCAAATAAATCTGAAGTCACTAACAAGTTGGAACTAATGGATGACTTTCTGGAGGTGGAGAAGTTGGCTCGTTTGTCAAATGATTCCAATGTAGATGCCACTATTTCAGTTTCTTCAAACAATAAGACAACTGACTTTGTGGCTGATGATTTATCAGAAGTCTGTACTGGCAAAGAAGGTCTGTCTGAAAAAAATGGCAATTCAGATCAATTGTCAAATGAAGTGTCTTCTGATGCTTTGATGTCAGCACCAGATTCTCAAACTGACGTTAGTGGCTTGTTATTAACAGAACTTAGATCAAGAATATTACTGGTTTTTGAGTCCTTAGCTAAGGATGCTGACATAGGGAAGATTGTGGATGATATTAAACATGTGCTTGAAGATTCACATGACACTACCATCCACCACTCTGTGGATGCCCATCCTTCTGACACTACATGTGATAGGAAGGATAATCCTGAAGATGCTGGCTTAAATCTTGAAAAGGAAGTAATTTCATCCCAGCAACCCAAAGAATATGTGCAGATAACTACAGATTTGGAAGCTGCAGTTTCTCAGATTCATGACTTTGTATTGTTCCTTGGCAAGGAAGCAATGACATCATTTCATGATGTATCTTCTGATGGAAATGAAATGAGGCAAAAGATTGAGGAATTCTCCGTCACCTTTAATAAAGTGTTATGCAACAATGCAAGTTTGCTACAGTTTGTTCTTGACCTGTCCTATGTTCTAGATAAAGCAAGTGAGTTCAGATTTAATGTCCTTGGCTACAAGGGCACCGAAGCTGAAAGTAACAGTCCAGATTGCATAGATAAGATTGCTTTGCCCGAAAATAAGTTAGTACAAGACAATTCATCTGGAGAAAGATATCAAAATGGTTGTTCCCATATTCTTAATCCATGTTCTAATCCTGAGGTTCCTGATGATGGAAATTTGGTCTCAGGTTATAAAGCAGATGCTGCATCACAGAAACTGTCAATAGAGGAGTTTGAAGAATTGAAACTAGAGAAAGAGAAAGTAGTGATTGATCTGTCAAATTGTACTGAGAATCTTGAAATGACAAAGTCTCAATTGCTAGAGGCAGAGCAACTTCTAGCTGAAGTTAAATCACAATTGGCTTCTGCTAATAAATCAAACAGCTTGGCTGAGACACAGCTAAGGTGTATGGCAGAATCGTACAACTCACTTGAAACACGTGCCCAGGACTTGGAAACTGAGCTGAACCATCTGCAAATCAAGATAGAATCTCTGGAGAATGAACTTCAAGAGGAAAAGAGGGCTCATGAAGCTGCTATGGCCAGGAGCAAGGAGCTAGAAGAGCAGTTAAAAAGGATTGAGTGCTTGGCAGCTGATGATGACCACAAGACTCCGCATGAGAGAAATTTGACAGCTGCTGCTGAAAAGCTAGCCGAGTGTCAAGAAACCATACTTCTTCTGGGCAAGCAGTTAAATTCTTTACGTCCACAAACTGAGGCAAATGACTCACCGTACAGTAAGATAAATCCAAAAGATGAAGGATTCACAGAAGATGAACATACTACTAATGGCCAAAAGTTTCAAGAATTAGGCCAGTTGGAGATGGACAGTTCTACTTCTGCTTTTGTGCCAAGATTGAGTTCGGAGTCCCCCTTGCATTTTTCCAACAGTTTATTTAGCCCTTCGGACAGCGAGTCCACCATTCCAGCCAGATCCCCAGTACAGCATTCTAAATCAAAACCAAAACACAGGCCTACCAAGTCAGCCTCTTCTTCAGTTTCTTCCGCCACCACACCTGAGAAACATGCACGGGGATTTAGTAGATTCTTTTCACCTAAAGGAAAGTCTGGTCATTGA 3243 0.4092 MDRRWPWKKKSSEKSVIEKATTALDSSDASNNQDNNKKPNYVQISVESYSHLSDLEDQVKTYEEKVQTLEDEIKEMNEKMSAANSEINTKESMVKQHAKVAEEAVSGWEKAEAEALALKNHLESVTLLKLTAEDRATHLDGALKECMRQIRNLKEEHEHKIQEVALSKTMQLDKIKGELEAKIVNFEQELLRSAAENGTLSRSLQERSNMLIKLSEEKGHAEGEIELLKGNIEACEREINSLKYELHVVSKELEIRNEEKNMSMRSAEAANKQHMEGVKKITKLEAECQRLRGLVRKKLPGPAALAQMKLEVESLGRDFGESRLRKSPVKPATPNLSPLPDFSLENVQKFQKDNEFLTERLLAMEEETKMLKEALAKRNSELQASRSMCAKTLSKLQSLEAQSQNQLKGSPKSIVQLTHERIYNQNSSSAPSLISMSEDGNDDAESCAESWATAIVSGLSQFPREKCNEESNKSEVTNKLELMDDFLEVEKLARLSNDSNVDATISVSSNNKTTDFVADDLSEVCTGKEGLSEKNGNSDQLSNEVSSDALMSAPDSQTDVSGLLLTELRSRILLVFESLAKDADIGKIVDDIKHVLEDSHDTTIHHSVDAHPSDTTCDRKDNPEDAGLNLEKEVISSQQPKEYVQITTDLEAAVSQIHDFVLFLGKEAMTSFHDVSSDGNEMRQKIEEFSVTFNKVLCNNASLLQFVLDLSYVLDKASEFRFNVLGYKGTEAESNSPDCIDKIALPENKLVQDNSSGERYQNGCSHILNPCSNPEVPDDGNLVSGYKADAASQKLSIEEFEELKLEKEKVVIDLSNCTENLEMTKSQLLEAEQLLAEVKSQLASANKSNSLAETQLRCMAESYNSLETRAQDLETELNHLQIKIESLENELQEEKRAHEAAMARSKELEEQLKRIECLAADDDHKTPHERNLTAAAEKLAECQETILLLGKQLNSLRPQTEANDSPYSKINPKDEGFTEDEHTTNGQKFQELGQLEMDSSTSAFVPRLSSESPLHFSNSLFSPSDSESTIPARSPVQHSKSKPKHRPTKSASSSVSSATTPEKHARGFSRFFSPKGKSGH* 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0203 1080 MobiDBLite consensus disorder prediction 1 40 - -
Gso6g0203 1080 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1080 - -
Gso6g0203 1080 Coils Coil 218 270 - -
Gso6g0203 1080 SUPERFAMILY Tropomyosin 787 961 - -
Gso6g0203 1080 MobiDBLite consensus disorder prediction 1014 1080 - -
Gso6g0203 1080 MobiDBLite consensus disorder prediction 1 16 - -
Gso6g0203 1080 MobiDBLite consensus disorder prediction 1048 1063 - -
Gso6g0203 1080 MobiDBLite consensus disorder prediction 17 40 - -
Gso6g0203 1080 PANTHER FILAMENT-PLANT-LIKE PROTEIN 1 1080 - -
Gso6g0203 1080 Coils Coil 176 196 - -
Gso6g0203 1080 MobiDBLite consensus disorder prediction 957 984 - -
Gso6g0203 1080 Coils Coil 347 374 - -
Gso6g0203 1080 MobiDBLite consensus disorder prediction 1014 1036 - -
Gso6g0203 1080 Coils Coil 136 163 - -
Gso6g0203 1080 Pfam Filament-like plant protein, long coiled-coil 90 962 IPR008587 -
Gso6g0203 1080 Coils Coil 52 93 - -
Gso6g0203 1080 Coils Coil 814 918 - -
Gso6g0203 1080 MobiDBLite consensus disorder prediction 605 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0203 Gso-Chr6 1934506 1940413 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0224 4 2034784 2040565 Gso6g0203 6 1934506 1940413 GST
Gso14g1838 14 50817488 50823799 Gso6g0203 6 1934506 1940413 PCT
Gso17g2176 17 41460278 41466617 Gso6g0203 6 1934506 1940413 PCT
Gso6g0203 6 1934506 1940413 Gso14g1838 14 50817488 50823799 PCT
Gso6g0203 6 1934506 1940413 Gso17g2176 17 41460278 41466617 PCT