Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1807 ATGGCGAATAGAGAAGAAAACAACGAGGGTCACAAATTCACAGTGAAATATGTTGGACTCAACGGAATGGAATGCGAAGGCAAATTGCCGAGGAGGGTGGTGGGAGTGAGAAATCACTGTTACCTTTTGAAATCCAAAATCGGAGAGGGTTCATTCTCCGCCGTGTGGAGAGCGGAGCAGAGACCACCAACCGGCGTTGACGTGGCGGTGAAGCAGGTCTTCCTCTCCAAACTCAACCCTCGCCTCAAGGCATGTTTGGATTGCGAGATCAATTTCTTGTCCTCCGTTAACCACCCCAATATTATTCGCCTTCTTCACTTCTTCCAGGATGATGGATGTGTGTACCTGGTCCTGGAGTTTTGTGCTGGAGGGAATCTTGCTTCTTATATTCAGAATCATGGGAGAGTTCAGCAACAAATAGCCAGAAAATTCATGCAGCAGCTTGGGTCTGGTCTAAAAGTATTACACTCGCATGACATTATTCACAGAGACTTGAAACCAGAGAACATTTTGCTATCAAGCCACGGGGTTGAAGCAGTGCTAAAGATAGCTGATTTTGGTCTCTCAAGGACTGTATGTCCTGGTGAATATGCTGAGACAGTTTGCGGTTCTCCATTATATATGGCTCCAGAAGTTCTTCAGTTCCAGAGATATGATGACAAGGCAGACATGTGGAGTGTTGGGGCCATTCTTTTTGAGCTTCTAAATGGCTACCCACCTTTTAATGGCAGAAATAATGTTCAGGTGTTGAGAAACATCAGATCCTGCACCTGTCTTCCATTTTCTCAACTGATTCTTTCAGGATTGGATCCTGACTGTCTTGATATTTGTTCAAGGCTACTACGCTTAAATCCAGTGGAGCGCCTCTCCTTTGATGAATTTTATTGGCATAGCTTTCTACAAAGAAAACTGATGGGAACATGA 924 0.447 MANREENNEGHKFTVKYVGLNGMECEGKLPRRVVGVRNHCYLLKSKIGEGSFSAVWRAEQRPPTGVDVAVKQVFLSKLNPRLKACLDCEINFLSSVNHPNIIRLLHFFQDDGCVYLVLEFCAGGNLASYIQNHGRVQQQIARKFMQQLGSGLKVLHSHDIIHRDLKPENILLSSHGVEAVLKIADFGLSRTVCPGEYAETVCGSPLYMAPEVLQFQRYDDKADMWSVGAILFELLNGYPPFNGRNNVQVLRNIRSCTCLPFSQLILSGLDPDCLDICSRLLRLNPVERLSFDEFYWHSFLQRKLMGT* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1807 307 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1T 37 296 - -
Gso4g1807 307 ProSitePatterns Protein kinases ATP-binding region signature. 47 71 IPR017441 GO:0005524
Gso4g1807 307 Pfam Protein kinase domain 43 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g1807 307 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 37 296 IPR045269 GO:0004674|GO:0006914
Gso4g1807 307 SMART serkin_6 41 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g1807 307 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Gso4g1807 307 Gene3D Transferase(Phosphotransferase) domain 1 36 306 - -
Gso4g1807 307 SUPERFAMILY Protein kinase-like (PK-like) 30 302 IPR011009 -
Gso4g1807 307 ProSiteProfiles Protein kinase domain profile. 41 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1807 Gso-Chr4 48302111 48305206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1807 41 293 CBL-interacting serine-threonine protein kinases AT2G30360 36.923 3.30e-46 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Gso4g1807 Pkinase 2.6e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1807 - - lja:Lj1g3v1289070.2 475.322