Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso4g1143 | ATGAAGTATGAAGCTTGCCTTCCAAGTAACATAAAAAAGCCAAAACCAAATTCATCCATTGAGGAGCGCTCTGATTTTATTAGGAGAAAATATGAGTTTCTACAGTTTTTGGATATTGAAGAAAATTTGTCCTGTCCCTTTGTACCATCTCATGCAAGATGTTCATCATATTCCCAGCGTAGTTCCTCGAGCAACAACTTCCCACAAGACAAAAAACATTATGATAAACAAGAAACTAAAAGTCTTATTGGGAGCACATTTCGAAATAGTTGGGGAAGAAAAGATTCTGAGCATAAGAGTTCAAAGAAGAGCAACTCATTGGCAGGTATGGTTGAATTTATTGGGTTGATCAAGGTGAATGTGGTTAAAGGCACTAACCTTGCTATCCGGGATGTAATGACTAGTGACCCTTATGTCATCATATCTCTAGGTCACCAATCAGTGAAGACACGTGTCATAAAAAGTAGTTTAAACCCAGTTTGGAACGAAAGCCTAATGTTGTCAATTCCGGATAACATTCCTCCTCTTAAAGTGCTTGTGTATGACAAGGATATTTTCTCAACGGATGATTTTATGGGAAAGGCCGAAATTGACATTCAACCTCTAGTTTCCGCTGCAAAGGCATATGAAAAATCTTCAATCAATGATTCCTTGCAGCTTGGAAAATGGGTAGCAAATGGTGACAACAACACTCTTGTTAAAGATGGTACCATCTCCCTTGAAGATGGGAAGGTCAAGCATGATATCTCAGTGAGACTACAACATGTTGAGAGAGGAGTGCTAGAGATTGAACTCGAATGTGTTCTTCTAACTCAATAG | 819 | 0.3858 | MKYEACLPSNIKKPKPNSSIEERSDFIRRKYEFLQFLDIEENLSCPFVPSHARCSSYSQRSSSSNNFPQDKKHYDKQETKSLIGSTFRNSWGRKDSEHKSSKKSNSLAGMVEFIGLIKVNVVKGTNLAIRDVMTSDPYVIISLGHQSVKTRVIKSSLNPVWNESLMLSIPDNIPPLKVLVYDKDIFSTDDFMGKAEIDIQPLVSAAKAYEKSSINDSLQLGKWVANGDNNTLVKDGTISLEDGKVKHDISVRLQHVERGVLEIELECVLLTQ* | 273 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso4g1143 | 272 | MobiDBLite | consensus disorder prediction | 58 | 79 | - | - | |
| Gso4g1143 | 272 | Pfam | C2 domain | 116 | 206 | IPR000008 | - | |
| Gso4g1143 | 272 | PANTHER | CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN | 1 | 272 | - | - | |
| Gso4g1143 | 272 | CDD | C2_ArfGAP | 114 | 259 | - | - | |
| Gso4g1143 | 272 | Gene3D | C2 domain | 113 | 265 | IPR035892 | - | |
| Gso4g1143 | 272 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
| Gso4g1143 | 272 | Gene3D | Arf GTPase activating protein | 1 | 44 | IPR038508 | - | |
| Gso4g1143 | 272 | ProSiteProfiles | C2 domain profile. | 94 | 213 | IPR000008 | - | |
| Gso4g1143 | 272 | SMART | C2_3c | 116 | 211 | IPR000008 | - | |
| Gso4g1143 | 272 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 112 | 207 | IPR035892 | - | |
| Gso4g1143 | 272 | PANTHER | ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 | 1 | 272 | IPR044518 | GO:0005096|GO:0005543 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gso4g1143 | Gso-Chr4 | 20751297 | 20771794 | Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gso4g1143 | 4 | 20751297 | 20771794 | Gso15g1975 | 15 | 44452608 | 44464926 | PCT | |
| Gso4g1143 | 4 | 20751297 | 20771794 | Gso11g2294 | 11 | 38850462 | 38856488 | PCT | |
| Gso15g1975 | 15 | 44452608 | 44464926 | Gso4g1143 | 4 | 20751297 | 20771794 | PCT | |
| Gso11g2294 | 11 | 38850462 | 38856488 | Gso4g1143 | 4 | 20751297 | 20771794 | PCT |