Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1088 ATGGGTGCAACTGAAGATCTTGTGAACAGCACACAGGGTGCAGCAGAATGTCAGGAAAACCGCACCACAGGTCCTTCAGAAAATCCAATAAAGGACAACACCAGTAGTACTTCAGAAAATCTTGTACAGTACAAAGCACTAGATGCAGAAAATCCTGTAAGTGATCAACAAGGTGGTGCAGAAATTCCTGAAACTGGAGGTGCTGAAAATCCTGCAAGTGACCAAAAAAATGTGGAACAAATTCCTGCAAGTGAGCAAGTGGGTATTGCAGAAAATATGGTAAATGACCAAGCAGGTGGTGCAGAAGATCCCACAAAGGACCGAACAGCAGGTGGTGCAGAAAATCCTTTAAATGACCTAATATTTCTTGCACAAAATCCTGAAAGTGAACAAGCAGGTAGTGTGGAAAATCTGTTAAGCAACCAAGCAGGTGTTGCAGAAGATCACACAAAGAACCGTGCAGCAGGTAGTGCAGAAAATCCTTCAAATGACCTAATAGATCTTGCACAAAATCCTGAAAGTGAACAAGCAGGTAGTGAGGAAAATCTGTTAAACTACCAAGCAGGTGGTGTAGAAAATTCTGCAAAGAACCATGCAGCAGCTGGTGCAGGAGATCCTCCAAATGACCAAGCTGCAGATGGTGCAGAGAATTCTGCAAAAAACCTATCAGCACGTAGTGCAGGAGATCCTCCACATGACCAAGCAGCAGATGCTATAGAAAATTCTTTAAACAACCAAACAGAAGCTACAGAGAAACTTGTAAAGGATGAACAGGGTACTGCAGAAAGTTTTGTAGAAGATGTAGCAGATGCTGTTGAAATGCCTGAAAACAGCCAAAGAAATGGTGTTGAAACCCCTGTAAGCAACAAAGCAGATCGCCTCCCAGAAGAAGCAAAGGAGATACTGAAATCATTGGCAAGTAAATGGGAGGATGTACTTGATGCAAATGCATTGCAGGTGATCCCTCTCAAAGGGGCAATGACGAATGAGGTATTCCAGATAAAGTGGCCAACTATGACAGGGGAATTGTCACGAAAGGTTCTTGTTAGAATGTATGGTGAGGGTGTGGACGTGTTCTTTGATAGGGATAATGAGATCCACACATTTGAATTCATGTCAAAGAATGGGCAAGGTCCTCGTCTACTAGGACGATTTACGAATGGCCGTGTTGAAGAGTTTATCCATGCACGGACATTATCAGCATCTGATCTACGTGATCCATCTATTTCTGCTCTTATAGCAGCCAAAATGAAGGAGTTCCATGATCTAGATATGCCTGGTGAAAAGAAAGTCCATCTTTGGGATAGATTGCGAAATTGGCTTAGTGAAGCCAAACGTTTATCGTCCCCTAAAGAAGTTGAAGCTTTTTATTTGGATACAATCGACAAAGAAATCTCTATTTTGGAAAAGGAACTATCAGGCTCTCACCAACAAATAAAATTTTGCCACAATGATTTACAATATGGTAACATAATGCTTGATGAAGAGACAAATTCTGTGACCATCATAGACTATGAATATGCTAGTTATAATCCTGTAGCATTTGATATAGCAAACCACTTCTGTGAGATGGCTGCTAACTATCATACAGAAGAGCCTCATATCCTTGACTACAATAAATATCCTGATTTTGAGGAGCGTCAAAGATTTGTGCAGGCATATCTGAGTACCTCCGGTGAGCAGCCTAGTGACAGTGAAGTGGAGCAGCTACTTCAAGAAATTGAGAAGTATACACTTGCAAATCATCTATTCTGGGGCGTTTGGGGAATAATTTCGGCACAAGTAAACACTATCGACTTTGACTACAAGGAGTATGCTAAACAGAGATTTCAAGAGTACTGGGCAAGGAAACCTTATCTTCTAATAAACTCTGAAGCGCCTTCTCCTTATAATGTGCCTGAGGGTACAGGAGAGCTAGCTTCAGCAGTGCCCACTAAATCGAAGAACTCTGGTATCTTTAGGAAGATGAAGAGAGTTTTGGGTCTCGGCTTGTTCAGGTCTAAGAGCTAG 2010 0.4184 MGATEDLVNSTQGAAECQENRTTGPSENPIKDNTSSTSENLVQYKALDAENPVSDQQGGAEIPETGGAENPASDQKNVEQIPASEQVGIAENMVNDQAGGAEDPTKDRTAGGAENPLNDLIFLAQNPESEQAGSVENLLSNQAGVAEDHTKNRAAGSAENPSNDLIDLAQNPESEQAGSEENLLNYQAGGVENSAKNHAAAGAGDPPNDQAADGAENSAKNLSARSAGDPPHDQAADAIENSLNNQTEATEKLVKDEQGTAESFVEDVADAVEMPENSQRNGVETPVSNKADRLPEEAKEILKSLASKWEDVLDANALQVIPLKGAMTNEVFQIKWPTMTGELSRKVLVRMYGEGVDVFFDRDNEIHTFEFMSKNGQGPRLLGRFTNGRVEEFIHARTLSASDLRDPSISALIAAKMKEFHDLDMPGEKKVHLWDRLRNWLSEAKRLSSPKEVEAFYLDTIDKEISILEKELSGSHQQIKFCHNDLQYGNIMLDEETNSVTIIDYEYASYNPVAFDIANHFCEMAANYHTEEPHILDYNKYPDFEERQRFVQAYLSTSGEQPSDSEVEQLLQEIEKYTLANHLFWGVWGIISAQVNTIDFDYKEYAKQRFQEYWARKPYLLINSEAPSPYNVPEGTGELASAVPTKSKNSGIFRKMKRVLGLGLFRSKS* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1088 669 Gene3D - 353 614 - -
Gso4g1088 669 SUPERFAMILY Protein kinase-like (PK-like) 285 621 IPR011009 -
Gso4g1088 669 PANTHER CHOLINE/ETHANOALAMINE KINASE 283 629 - -
Gso4g1088 669 CDD ETNK_euk 318 616 - -
Gso4g1088 669 Gene3D Phosphorylase Kinase; domain 1 305 393 - -
Gso4g1088 669 MobiDBLite consensus disorder prediction 122 147 - -
Gso4g1088 669 PANTHER CHOLINE KINASE 2-RELATED 283 629 - -
Gso4g1088 669 MobiDBLite consensus disorder prediction 155 192 - -
Gso4g1088 669 MobiDBLite consensus disorder prediction 1 44 - -
Gso4g1088 669 MobiDBLite consensus disorder prediction 1 236 - -
Gso4g1088 669 Pfam Choline/ethanolamine kinase 345 545 - -
Gso4g1088 669 Pfam Choline kinase N terminus 241 317 IPR007521 GO:0016773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1088 Gso-Chr4 17643973 17649784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1088 282 625 Acyl Lipid Metabolism Gene Families AT1G74320 68.314 0.0 520
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1088 4 17643973 17649784 Gso6g2543 6 47156053 47162459 GST
Gso4g1088 4 17643973 17649784 Gso11g2231 11 38013919 38020131 PCT
Gso11g2231 11 38013919 38020131 Gso4g1088 4 17643973 17649784 PCT