Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0387 ATGGTGGACAAGATGAATATGCTGATATTCAAGTCCCTTCAGATTTCTTTGCTGCTAGTTTTCTCTATCAGAAACACCACAGCAGAAAAGAAAACCCATCACACAAAACACACATACATAATTCACATGGACAAGTTCAACATGCCAGAGAGTTTTAACGACCATCTCCTCTGGTTTGATTCATCACTAAAATCAGTATCAGACTCAGCAGAGATGCTCTACACATATAAAAAAGTAGCTCATGGCTTCTCTACAAGGCTAACTACGCAAGAAGCAGAGTTGCTCTCAAAGCAACCTGGTGTTCTCTCCGTCATCCCGGAAGTTAGATATGATCTTCACACAACTCGAACACCAGAGTTTCTGGGGTTGGCCAAATACAGCACTCTTTCACTGGCCTCTGGCAAACAAAGCGATGTGATTGTCGGAGTGCTAGACACTGGTGTGTGGCCTGAACTAAAGAGCTTCGACGACACCGGACTGGGGCCAGTACCTAGTAGCTGGAAAGGTGAGTGTGAGAGAGGTAAGAATTTCAACCCATCAAACTGTAATAAGAAACTTGTTGGTGCAAGGTTTTTCTCGAGGGGCTACGAGGCAGCCTTTGGACCCATCGACGAAAAGACGGAATCAAAGTCACCAAGGGATGATGATGGCCACGGAAGTCACACCTCAACAACGGCAGCAGGTTCTGCAGTTGTAGGAGCAAGCCTCTTTGGTTTTGCTAATGGGACAGCAAGAGGCATGGCCACACAAGCCAGACTTGCAACTTACAAAGTGTGTTGGCTTGGAGGGTGCTTTACATCAGACATAGCTGCTGGAATTGACAAGGCCATTGAAGATGGTGTCAACATCCTTTCCATGTCAATTGGGGGAGGTTTGATGGATTACTACAAAGACACTATTGCAATTGGAACTTTTGCGGCCACTGCCCATGGAATACTGGTTTCCAATTCAGCAGGAAATGGTGGGCCTAGTCAAGCAACTTTGTCTAATGTGGCACCATGGCTAACCACAGTGGGTGCGGGAACTATAGACCGTGATTTCCCTGCCTATATCACCCTTGGAAATGGAAAGATGTACACAGGGGTGTCACTTTACAATGGCAAACTCCCACCCAATTCTCCACTGCCAATTGTTTATGCTGCAAATGTAAGCGATGAATCCCAAAATCTGTGCACCAGAGGTACTTTGATTGCTGAAAAAGTAGCCGGAAAAATCGTGATATGTGACCGAGGAGGGAATGCTAGGGTGGAAAAGGGTTTGGTGGTGAAGAGTGCTGGAGGCATTGGGATGATACTATCAAACAATGAAGACTATGGGGAAGAGTTAGTTGCTGACTCCTATCTCCTCCCTGCAGCAGCTTTGGGCCAGAAATCAAGCAATGAGTTAAAGAAGTATGTTTTCTCATCTCCCAATCCCACAGCTAAGCTTGGATTTGGTGGCACCCAATTAGGGGTTCAACCATCCCCAGTGGTGGCAGCTTTCAGCTCAAGAGGGCCAAATGTGCTCACACCAAAAATACTCAAACCAGACCTGATTGCTCCAGGAGTCAACATCCTAGCTGGGTGGACTGGTGCAGTTGGACCAACTGGCTTGACTGAAGACACCAGACATGTGGAATTCAACATCATTTCAGGCACTTCCATGTCCTGCCCCCATGTCACTGGCTTAGCTGCCCTTCTTAAGGGCACTCACCCAGAATGGAGCCCTGCAGCTATAAGGTCTGCCCTCATGACCACAGCTTACAGAACCTACAAAAATGGCCAAACCATAAAAGATGTCGCCACCGGGCTACCGGCTACGCCATTTGATTATGGGGCCGGACACGTTGATCCAGTGGCTGCGTTTGATCCTGGTCTTGTGTATGATACTTCCGTGGATGACTACTTGAGCTTCTTCTGTGCCTTAAACTACAGTTCCTATCAAATAAAGCTTGTTGCAAGAAGAGACTTCACCTGCAGCAAAAGGAACAATTACAGAGTGGAAGATCTCAATTACCCATCTTTTGCTGTTCCTTTCAACACAGCTTATGGAGTAAAGGGTGGTTCTCGCAAACCAGCCACTGTCCAATATACAAGGACTTTAACAAACGTGGGTGCCCCGGCAACGTATAAAGTTTCGGTGTCGCAGTCTCCCTCGGTGAAGATTATGGTTCAACCACAAACACTTAGTTTCGGGGGACTTAATGAGAAGAAGAACTACACAGTTACGTTCACGTCTTCGTCAAAGCCTTCTGGAACAAACAGCTTTGCTTATCTGGAATGGTCGGATGGGAAACATAAGGTTACTAGTCCCATTGCTTTCAGCTGGACTTAG 2313 0.4669 MVDKMNMLIFKSLQISLLLVFSIRNTTAEKKTHHTKHTYIIHMDKFNMPESFNDHLLWFDSSLKSVSDSAEMLYTYKKVAHGFSTRLTTQEAELLSKQPGVLSVIPEVRYDLHTTRTPEFLGLAKYSTLSLASGKQSDVIVGVLDTGVWPELKSFDDTGLGPVPSSWKGECERGKNFNPSNCNKKLVGARFFSRGYEAAFGPIDEKTESKSPRDDDGHGSHTSTTAAGSAVVGASLFGFANGTARGMATQARLATYKVCWLGGCFTSDIAAGIDKAIEDGVNILSMSIGGGLMDYYKDTIAIGTFAATAHGILVSNSAGNGGPSQATLSNVAPWLTTVGAGTIDRDFPAYITLGNGKMYTGVSLYNGKLPPNSPLPIVYAANVSDESQNLCTRGTLIAEKVAGKIVICDRGGNARVEKGLVVKSAGGIGMILSNNEDYGEELVADSYLLPAAALGQKSSNELKKYVFSSPNPTAKLGFGGTQLGVQPSPVVAAFSSRGPNVLTPKILKPDLIAPGVNILAGWTGAVGPTGLTEDTRHVEFNIISGTSMSCPHVTGLAALLKGTHPEWSPAAIRSALMTTAYRTYKNGQTIKDVATGLPATPFDYGAGHVDPVAAFDPGLVYDTSVDDYLSFFCALNYSSYQIKLVARRDFTCSKRNNYRVEDLNYPSFAVPFNTAYGVKGGSRKPATVQYTRTLTNVGAPATYKVSVSQSPSVKIMVQPQTLSFGGLNEKKNYTVTFTSSSKPSGTNSFAYLEWSDGKHKVTSPIAFSWT* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0387 770 Pfam Subtilase family 137 591 IPR000209 GO:0006508|GO:0008236
Gso4g0387 770 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Gso4g0387 770 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
Gso4g0387 770 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
Gso4g0387 770 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 768 IPR045051 -
Gso4g0387 770 SUPERFAMILY Subtilisin-like 112 619 IPR036852 GO:0004252|GO:0006508
Gso4g0387 770 MobiDBLite consensus disorder prediction 203 225 - -
Gso4g0387 770 MobiDBLite consensus disorder prediction 203 220 - -
Gso4g0387 770 CDD PA_subtilisin_like 350 476 - -
Gso4g0387 770 Gene3D Peptidase S8/S53 domain 138 628 IPR036852 GO:0004252|GO:0006508
Gso4g0387 770 Pfam Fibronectin type-III domain 662 766 IPR041469 -
Gso4g0387 770 Pfam Peptidase inhibitor I9 38 113 IPR010259 -
Gso4g0387 770 Gene3D - 632 769 - -
Gso4g0387 770 CDD Peptidases_S8_3 110 581 IPR034197 -
Gso4g0387 770 ProSiteProfiles Serine proteases, subtilase domain profile. 109 615 - -
Gso4g0387 770 Pfam PA domain 376 462 IPR003137 -
Gso4g0387 770 Gene3D - 344 484 - -
Gso4g0387 770 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 113 IPR037045 -
Gso4g0387 770 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 25 768 - -
Gso4g0387 770 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0387 Gso-Chr4 3529895 3532889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0387 38 770 Subtilisin-like Serine Gene Family AT5G67360 65.672 0.0 994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0387 4 3529895 3532889 Gso4g0387 4 3529895 3532889 ECH
Gso4g0387 4 3529895 3532889 Gso6g0364 6 3410480 3413236 GST
Gso14g0750 14 7834109 7836959 Gso4g0387 4 3529895 3532889 PCT
Gso17g2016 17 39545244 39547930 Gso4g0387 4 3529895 3532889 PCT
Gso4g0387 4 3529895 3532889 Gso14g0750 14 7834109 7836959 PCT
Gso4g0387 4 3529895 3532889 Gso17g2016 17 39545244 39547930 PCT