Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0335 ATGCAAGCGGTGGGTAGAATAATTAGTCAGGGTGTGTACACGTTTTCGGGGCCGTTTCATCCGTTCGGTGGCGCCGTTGATATTGTGGTGGTGGAACAGCAAGATGGAACTTTCAAGTCCTCTCCTTGGTACGTTCGATTTGGCAAATTCCAAGGGGTTTTGAAGGCAAGGGAAAAGGTTGTTGATATCTGTGTCAATGGGGTGCAAGCTGGTTTCCAAATGCATCTTGATCATAAAGGGGAAGCCTTTTTTCTCAGGGAAATCGATGCACAAGAAGAAGAAGCCATTTTGATGTTTCCTTCTTCTTCTGGCGATGATGCAGATGATCAGACTCGCTCTCACTCTCTCAGGTCCGAGAGTTTGAATTATGATGCTGCTGCTGAGGTTGTGGGAAGGACTACTAGCTCTCGCCGCTCCCGGATACTTGGCCTTGTGTTTGGGAGAAGGTCTTTGAAGAGGGAAGATGGTGCGGGTGTTGGTGATGGTGATGGTGTTGGTGATGGAATTGGGAACAGGGTTGGTTCCTTGGAGCGCGCCGAGATTGCGGCTAACTTGTTAGACATCAATTGGTCCACCAATCCCTCCGCTGAACAAGGGCAAGATGTTATTGCTAACCCGTCTGGGGATGGAGAGGTGGTTGTGGAGAATGGCGAATTGAATGAGGAAGCTTGTTTTGGTGGCGAGTGTGACTTGAATTGGAAGGAAATTGTGTATGACATTGCAGAGTCTGATGTGCAAGTTGCATGTGTGGAGGTGGAGGTTGAAGCATGCGTAGAAAAGGAATTGAATGGAGAAGAGGTTTCTATTGATGCGCCGGGTGAAAATAGTAATGAATCATCATCAGAGACTTCCAAGTTGGGAGTGGATTGTTCTAGTGAACAAGCTCATGAGGTGATGTACCTTGCTGGCCCAGAATGTGAAGAAGTCCATGTCCATGTCCACGATGAAGTCTTGCATGGTGCAACTGTACTGCTAGCTGAGGATACAGAAGCTGAGGAAGTTATTGAGAATGCTGATCTTGAGTCTCATTCTCGGATTCAACAAACAGATAGTTCAGATTCTGATGATATTAGGTACAATGAGGTGGTTGTTGAAGAGCAACCAACATCTCCAAAATCTCAAACTGTCAAAATGGGCCTAGGACATTATTCAAATGAGAAAGTTGAGCCAAATTGTATTATCAAACCTTCCAGTTACAGCATCTTGGCTGACCAAGCCTTAGATGACAATAATATGAAGGACAAAGATGTCTCTAGCACACTATCATCTCCTCTGGATTCTGTTGATGATTCTTTACCTAGAAAAGCATCAAGGAGATCATCATCACCAAGTTCAGAGGACGAAAATTTCCTTTTTAGTGGCCATGACAAAAGTGTTATCAATGATCGATTCGAGAGATCATTCTCCCCTGAACATGTAGATAAAGAAGATCATGTTTCTTATGGGAATGACAGTGAAAAGTTAACAGCAATATCCAATCCCATAGACATTCCTATGAACAAAGCTGCTGGGGAGGAAGTTGTGCAGTTTTCGGGATCCTTGCCAAATATTTCTTCTGGTAGTGACATCATGGTCGAACACAATGTTCGATATCCTTTATGTCAATCACTGGACTCAAAATCCACATCCTTGCCATGGGCATTTCCTGGAAAAGATGACTTGGAATGTCTAAAATCAGACGAAGACAAAGGAAACCAGTTATCACATGAAGGGCAAGGTGCCAAGGATTACAATGATTCTGGGGAACTCAAAGGAGATCCATCAACACGCAACCCTTCCGCTGGTGGAAGTTGGAGAATTTGGCCTTTCTCCTTGAGGAGAGAAGGATCTAGAAAGTCTATGTTGCCCCCTTCTCCAAGTGATTCCAAAAACACTACTTTTGTTAATTCTCCAGAGAATACGATTAGTACTGATATGAACAAAAATGAGCTCAAACCCAATTTAATGAAAAAGAAGGTTAAGGAAATGACTCCAACCTCTGAACAGCTAGCCTCGTTGAATCTGAAGGATGGGATGAATACTGTAACCTTCACTTTCTCTACAGCTGTGCTGGGGAAGCAGCAGGTTGATTGTCGAATATATTTATGGAAATGGAACGCTCGTATAGTGATCTCAGATGTGGATGGTACAATTACAAGGTCAGATGTTCTTGGTCAGTTCATGCCTTTGGTTGGTATTGACTGGTCACAGACAGGTGTTGCACATTTATTCTCCGCTATCAAGGAAAATGGTTATCAACTGCTTTTTCTCAGTGCTCGTTCAATTTCTCAGGCCTATATTACACGGCAATTCTTACTAAACCTTAAACAGGATGGAAAAGTTTTACCAGATGGTCCTGTTGTTATTTCCCCTGATGGACTTTTTCCCTCTCTATATCGAGAAGTTATTAGGAGGGTTCCTCATGAATTCAAAATAGCATGCTTAGAGGACATCAAGGCACTTTTTCCTTCTGATAGCAGTCCATTCTATGCTGGTTTTGGTAATAGGGATACGGATGAAATCAGCTACCTTAAGGTTGGAATTCCCCTAGGAAAAATTTTCATTATTAATCCCAGGGGAGAGGTGGTTATAAACCGCCGTGTTGACGCAAAATCATATACTTCTCTGCATGCTCTTGTGAATGGAATGTTCCCCCCTACGAGCTCTTCTGAGCAGGAGGACTTTAATTCATGGAATTTCTGGAAACTACCCCCTCCTGCCATAGATATTTGA 2712 0.4329 MQAVGRIISQGVYTFSGPFHPFGGAVDIVVVEQQDGTFKSSPWYVRFGKFQGVLKAREKVVDICVNGVQAGFQMHLDHKGEAFFLREIDAQEEEAILMFPSSSGDDADDQTRSHSLRSESLNYDAAAEVVGRTTSSRRSRILGLVFGRRSLKREDGAGVGDGDGVGDGIGNRVGSLERAEIAANLLDINWSTNPSAEQGQDVIANPSGDGEVVVENGELNEEACFGGECDLNWKEIVYDIAESDVQVACVEVEVEACVEKELNGEEVSIDAPGENSNESSSETSKLGVDCSSEQAHEVMYLAGPECEEVHVHVHDEVLHGATVLLAEDTEAEEVIENADLESHSRIQQTDSSDSDDIRYNEVVVEEQPTSPKSQTVKMGLGHYSNEKVEPNCIIKPSSYSILADQALDDNNMKDKDVSSTLSSPLDSVDDSLPRKASRRSSSPSSEDENFLFSGHDKSVINDRFERSFSPEHVDKEDHVSYGNDSEKLTAISNPIDIPMNKAAGEEVVQFSGSLPNISSGSDIMVEHNVRYPLCQSLDSKSTSLPWAFPGKDDLECLKSDEDKGNQLSHEGQGAKDYNDSGELKGDPSTRNPSAGGSWRIWPFSLRREGSRKSMLPPSPSDSKNTTFVNSPENTISTDMNKNELKPNLMKKKVKEMTPTSEQLASLNLKDGMNTVTFTFSTAVLGKQQVDCRIYLWKWNARIVISDVDGTITRSDVLGQFMPLVGIDWSQTGVAHLFSAIKENGYQLLFLSARSISQAYITRQFLLNLKQDGKVLPDGPVVISPDGLFPSLYREVIRRVPHEFKIACLEDIKALFPSDSSPFYAGFGNRDTDEISYLKVGIPLGKIFIINPRGEVVINRRVDAKSYTSLHALVNGMFPPTSSSEQEDFNSWNFWKLPPPAIDI* 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0335 903 MobiDBLite consensus disorder prediction 609 641 - -
Gso4g0335 903 MobiDBLite consensus disorder prediction 615 641 - -
Gso4g0335 903 SUPERFAMILY HAD-like 694 846 IPR036412 -
Gso4g0335 903 MobiDBLite consensus disorder prediction 337 357 - -
Gso4g0335 903 PANTHER LIPIN 1 903 IPR026058 -
Gso4g0335 903 MobiDBLite consensus disorder prediction 557 583 - -
Gso4g0335 903 MobiDBLite consensus disorder prediction 413 452 - -
Gso4g0335 903 Pfam lipin, N-terminal conserved region 1 94 IPR007651 -
Gso4g0335 903 MobiDBLite consensus disorder prediction 265 287 - -
Gso4g0335 903 SMART lns2 702 858 IPR031315 -
Gso4g0335 903 Pfam LNS2 (Lipin/Ned1/Smp2) 654 878 IPR013209 -
Gso4g0335 903 MobiDBLite consensus disorder prediction 557 597 - -
Gso4g0335 903 MobiDBLite consensus disorder prediction 270 287 - -
Gso4g0335 903 PANTHER GH19076P 1 903 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0335 Gso-Chr4 3019789 3028959 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0335 4 3019789 3028959 Gso4g0335 4 3019789 3028959 ECH
Gso4g0335 4 3019789 3028959 Gso6g0319 6 2961772 2970006 GST
Gso17g2060 17 40224968 40230591 Gso4g0335 4 3019789 3028959 PCT
Gso4g0335 4 3019789 3028959 Gso17g2060 17 40224968 40230591 PCT