Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0312 ATGTACACTACTTCGCATACAGAAATGCCAACCTTTGCACCCTTGCCAGAGCCAGATCTCTCCTTAAACATAAGCCCACCCTTCACTTCAGATTCTGACGCCAAAAAAGTGGAAATAAGCTGCAACGGATTATTAACATTAACTACAAAAACGCTTTACAACGATATGTGCTCAACCTCGGATTCTGGTAGCAGTGGAAGCGATTTAAGCCACGAAAATGGTTTTTTCGGCCACACGGACACTGCCTACAACCTTGGCCATCATGAACCGACATTGAGCTTAGGCATCGAAACGACAAATTCGAATCCTTATCCTGTCCAACAAGGAGCACTCTCGAGAAACAACTTCAGTCACTTCCACAACTACCAACCTCACAGCAATACTCTGGATTTCAAGCGAAATGCTAGAGTCATTCATGGCGTGAAAAGAAACGCCAGAGCTCCTAGAATGCGATGGACTACGACCCTCCATGCTCATTTTGTTCATGCGGTTCAGCTTCTTGGTGGTCATGAAAGGGCAACTCCGAAGTCAGTGTTAGAGTTGATGAATGTTAAAGATCTAACTCTATCTCACGTGAAGAGTCACTTGCAGATGTATAGAACAGTGAAGAGCTCTGACAAAGGCAGCGCAGGATATGGGCAGACAGGTATAGGGTTGAGCCAAAAGCCAGGAATTGTCGATCTGTATGGAGTCTTAGCTTGTGAGAGAGCCAATTTGCCACAGCCGCTGCTAAAATCCCAAAGGGCGTCATGGCAATCATCAATAGAGACAAATTCAATAAATTATACACAGAACCCCATAATCAATTCGATGTATTCTCATCTCAAAGGAAACCAAACCATGGTGGGTGGACAGCATTATGAATGTCTGTCAAATTGCATGAAGGAGAAATTGGATTCTTGCTCTTTGTCACGTTCCGATATGACGCTTGACCTAGAATTTACCCTTGGAAGGTCCACTAGTTGCAAACAGACCACGCTGAATCAAGAGAATTAA 996 0.4408 MYTTSHTEMPTFAPLPEPDLSLNISPPFTSDSDAKKVEISCNGLLTLTTKTLYNDMCSTSDSGSSGSDLSHENGFFGHTDTAYNLGHHEPTLSLGIETTNSNPYPVQQGALSRNNFSHFHNYQPHSNTLDFKRNARVIHGVKRNARAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLSHVKSHLQMYRTVKSSDKGSAGYGQTGIGLSQKPGIVDLYGVLACERANLPQPLLKSQRASWQSSIETNSINYTQNPIINSMYSHLKGNQTMVGGQHYECLSNCMKEKLDSCSLSRSDMTLDLEFTLGRSTSCKQTTLNQEN* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0312 331 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 321 IPR044847 GO:0000976|GO:0006355|GO:0010158
Gso4g0312 331 Pfam Myb-like DNA-binding domain 149 200 IPR001005 -
Gso4g0312 331 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 321 - -
Gso4g0312 331 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 148 201 IPR006447 GO:0003677
Gso4g0312 331 Gene3D - 147 204 - -
Gso4g0312 331 SUPERFAMILY Homeodomain-like 146 202 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0312 Gso-Chr4 2812832 2816421 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso4g0312 Myb_DNA-binding 9.6e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0312 4 2812832 2816421 Gso4g0312 4 2812832 2816421 ECH
Gso4g0312 4 2812832 2816421 Gso6g0294 6 2738092 2741138 GST
Gso14g0670 14 6713593 6718589 Gso4g0312 4 2812832 2816421 PCT
Gso17g2086 17 40515902 40520927 Gso4g0312 4 2812832 2816421 PCT
Gso4g0312 4 2812832 2816421 Gso14g0670 14 6713593 6718589 PCT
Gso4g0312 4 2812832 2816421 Gso17g2086 17 40515902 40520927 PCT