Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0305 ATGGCGAAATCGAGCGCCGACGATGCGGAGCTACGGCGAGCTTGCGAGCATGCCATTGAAGGCACGAAGCACAAGGTCGTTCTCTCCATTCGAACCGTCAAGACTCACGGCACTTGGGGAAAAACTGCTAAGCTTGGTCGTCAAATGGCCAAGCCTAGGGTTCTCGCTCTCTGCACCAAAGCCAAAGTTCAGCGGACTAAAGCTTTTCTACGAGTTTTAAAGTATTCCAACGGAGGAGTTCTTGAGCCTGCTAAGTTATACAAGCTGAAGCACCTCTCAAAAATGGAAGTTGCAACAAATGATCCCAGTGGATGTACATTTACACTGGGGTTTGATAACCTTAGAAGCCAGAGTGTGGCTCCTCCACAGTGGACAATGCGCAATGTCGATGACAGAAATCGCCTCCTGTTTGGTATCTTAAATATCTGCAAAGATATCCTTGGTCGCCTGCCTAAGGTTGTTGGTATTGATGTTGTGGAGATGGCTCTTTGGGCTAAGGAAAATACACCCGCAGTTTCCACTCAAAATAACCAACAAGATGGCACTTCTGTTGAATCTACTGCGGCTGAAACAGAATTGAAAGTCTATGTTGAAAAGGAACTTGTCTCCCAGGCAGAGGAAGAGGACATGGAGGCTCTTCTTGGAACTTATATCATGGGTATTGGTGAAGCCGAGGCATTTTCTGAAAGGTTAAAAAGAGAGCTCCAGGCTCTGGAAGCAGCAAATGTGCATGCCATTTTAGAAAGTGAACCTCTGATAGATGAGGTGTTGCAAGGGCTTGAAGCAGCATCAAATTGCGTGGAAGACATGGATGAATGGTTAGGCATGTTCAATGTAAAGCTTCGACACATGAGGGAAGATATTGAATCAATTGAAACCCGCAATAACAAGTTGGAAATGCAAAATGTGAATAACAGAACTCTTATTCAAGAGCTTGATAAGCTTCTTGAGCAATTGAGTATCCCTTCTGAGTATTCAGCATGTTTGACAGGAGATTCATTTGATGAAGCACAAATGCTGCAAAATATGGAAGCATGTGAGTGGTTGACAACTGCCATGCGTGGTCTTGAAGTGCCTAACATAGATCCTACTTATGCAAAAATGAGAGCAGTTAAAGAGAAGCGAGGAGAACTTCAAATAATAAAGTCTGTTTTTGTTGGGAAGGCTTCTGAATACTTGAGAAGTTACTTCGCTAGTTTTGTGGATTTCATGTTAAATGATAAAAATTACTTTTCTCAGCGGGGACAGTTGAAAAGGCCAGATCATGCTGATTTGAGGTACAAGTGCAGGACATATGCACGCCTTCTGAAGCATTTAAAGATTCTTGATAAGAATTGCTTGGGTCCACTGAGAAAAGCTTATTGCAGTTCTCTAAACTTGCTTCTTCGCAGGGAGGCCCGCGAGTTTGCTAATGAACTTCGTGCTAGTGCTAAAACTTCCAAAACCCCAACTGTTTGGGAAGGCTTCATGGGTTCTGGTCAAAATGTAAATTCTGCTGACACTGCAGCAGTTTCTGAAGCGTATGCAAAGATACTCACAATTTTTATCCCACTTCTGGTGGATGAGAGCTCATTTTTTGCACACTTCATGTGCTTTGAAGTTCCCTCACTTGTTGATGGTAATAAAACTGGACACAATGACCAGAAAAATGATGATGATTTGGGAATTATGGACATTGATGAGAATGACAGTAAATCTGGTAAAAATTCTGTGGATTTTGCAGCTTTAAATGAATCACTTCAGGATTTGCTTGATGGAATTCAAGAAGACTTCGCTGCTGTTGTGGATTGGGCACACAAAATTGATCCTTTATGCTGCATATCAATGCATGGAACTACAGAACGCTATCTCTCTGGTCAGAAAGCTGATGCAGCAGGATTTGTACGCATTTTGCTTGGTGATCTAGAGTCTCGCATATCTATGCAGTTCAGCCGTTTTGTGGATGAAGCTTGCCATCAGATTGAAAGAAGTGAGCGCAATGCTCGCCAAACGGGTGTCCTACCGTACATTCCTAGATTTGCATCCCTTGCAACACGGATGGAGCAGTATGTTGCAGGACAGTCGAGGGATTTGGTTGACCAAGCATACACAAAATTTGTTAGCATAATGTTTGTAACTTTGGAAAAAAATGCACAAACAGATCCCAAGTATGCAGACATTTTTCTTATTGAAAACTATGCCGCATTTCAGAATAGTTTGTATGACCTTGCAAATGTCGTTCCCACTTTGGCGAAGTTTTATCATCAGGCTAGTGAAGCCTACGAGCAAGCTTGCACACGCCATATTAGTGTGATTATCTACTATCAATTTGAACGCCTTTTCCAGTTTGCTCGAAAGATTGAGGACTTGATATTGAATAATGTTGCACCTGAAGAGATTCCTTTCCAAGTTGGGCTGTCAAAAGCAGATCTACGGAAGACGTTAAAATCCAGTTTATCCGGGGTGGACAAGTCCATTGCTGCGATGTATAAGAAGTTGCATAAAAACTTGACTTCGGAGGAACTCTTACCTTCCTTGTGGAATAAATGCAAGAATGATTTTCTTGATAAGTACGAAACCTTTGTCCAACTTGTCGCGAGGATTTACCCTGCTGAATCAGTCCCTTCTGTAGCAGAGTTGCGAGACCTTTTAGCTTCCATGTAA 2643 0.4249 MAKSSADDAELRRACEHAIEGTKHKVVLSIRTVKTHGTWGKTAKLGRQMAKPRVLALCTKAKVQRTKAFLRVLKYSNGGVLEPAKLYKLKHLSKMEVATNDPSGCTFTLGFDNLRSQSVAPPQWTMRNVDDRNRLLFGILNICKDILGRLPKVVGIDVVEMALWAKENTPAVSTQNNQQDGTSVESTAAETELKVYVEKELVSQAEEEDMEALLGTYIMGIGEAEAFSERLKRELQALEAANVHAILESEPLIDEVLQGLEAASNCVEDMDEWLGMFNVKLRHMREDIESIETRNNKLEMQNVNNRTLIQELDKLLEQLSIPSEYSACLTGDSFDEAQMLQNMEACEWLTTAMRGLEVPNIDPTYAKMRAVKEKRGELQIIKSVFVGKASEYLRSYFASFVDFMLNDKNYFSQRGQLKRPDHADLRYKCRTYARLLKHLKILDKNCLGPLRKAYCSSLNLLLRREAREFANELRASAKTSKTPTVWEGFMGSGQNVNSADTAAVSEAYAKILTIFIPLLVDESSFFAHFMCFEVPSLVDGNKTGHNDQKNDDDLGIMDIDENDSKSGKNSVDFAALNESLQDLLDGIQEDFAAVVDWAHKIDPLCCISMHGTTERYLSGQKADAAGFVRILLGDLESRISMQFSRFVDEACHQIERSERNARQTGVLPYIPRFASLATRMEQYVAGQSRDLVDQAYTKFVSIMFVTLEKNAQTDPKYADIFLIENYAAFQNSLYDLANVVPTLAKFYHQASEAYEQACTRHISVIIYYQFERLFQFARKIEDLILNNVAPEEIPFQVGLSKADLRKTLKSSLSGVDKSIAAMYKKLHKNLTSEELLPSLWNKCKNDFLDKYETFVQLVARIYPAESVPSVAELRDLLASM* 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0305 880 MobiDBLite consensus disorder prediction 544 561 - -
Gso4g0305 880 PANTHER SEC3/SYNTAXIN-RELATED 1 880 - -
Gso4g0305 880 Coils Coil 221 248 - -
Gso4g0305 880 Coils Coil 281 318 - -
Gso4g0305 880 Pfam Exocyst complex component Sec3 224 863 IPR019160 GO:0000145|GO:0006887
Gso4g0305 880 MobiDBLite consensus disorder prediction 542 561 - -
Gso4g0305 880 PANTHER EXOCYST COMPLEX COMPONENT SEC3B 1 880 - -
Gso4g0305 880 Pfam Exocyst complex component SEC3 N-terminal PIP2 binding PH 49 144 IPR028258 -
Gso4g0305 880 SMART Sec3_PIP2_bind_2 48 146 IPR028258 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0305 Gso-Chr4 2756414 2769685 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0305 4 2756414 2769685 Gso4g0305 4 2756414 2769685 ECH
Gso14g0665 14 6627003 6631381 Gso4g0305 4 2756414 2769685 PCT
Gso17g2090 17 40596871 40611531 Gso4g0305 4 2756414 2769685 PCT
Gso4g0305 4 2756414 2769685 Gso14g0665 14 6627003 6631381 PCT
Gso4g0305 4 2756414 2769685 Gso17g2090 17 40596871 40611531 PCT