Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0300 ATGGAGCTAACCGTTCGGTGCACCTCATGCGCGCTGTCCAGATTTCATTGCAAACTTCGATTCGCCGTGGTTGTTTTCGAGATTATATTGATATTGGCATGGGTGGAGGCCCACAATGCAAAGCCCCAGGAACACCAACTTCAATGGGGAGGCTTGGAGAGGAATACTGAGAATATTGCCTCTCACTCTTGCATACACGACCAGATTCTTGATCAGAGGAAGCGACCTGGTCGCAAGGTGTATTCAATTACCCCACAGGTTTATGAGCCTGTTCGCTTGAAACACCTTCAGCATAAAGGTAGGACATTACTTGATGTGCCAACATCATCAAGGCCTCAAGAGGATGCAAAGAAGCCTATTAGGATATATCTAAATTATGATGCTGTTGGTCACTCCCCTGACAGGGATTGTCGAGCAATTGGCAATATTGTCAAACTTGGGGAGCCTCCAATGACTTCTCCTGGTTTTCCTTCTTGCGACCCCCATGGTAATCCTCCAATCTTAGGTGATTGTTGGTATAACTGCACTTCTGAAGATATCTCCGGAGATGACAAAAAACGTCGCCTTCGTAAGGCATTAGGTCAGACAGCTGACTGGTTTAGGAGAGCATTGGCTGTTGAGCCTGTCAAGGGGAACCTGCGGTTAAGTGGATATTCTGCTTGTGGACAAGATGGAGGTGTGCAACTTCCTCGTGGATATATTGAGGAGGGTGTCTCTGATGCCGACTTGGTTCTTTTGGTGACTACAAGACCTACAACTGGAAGTACACTTGCCTGGGCGGTGGCATGTGAACGAGATCAATGGGGTCGTGCTATAGCTGGACATGTTAATGTTGCGCCTCGCCATTTGACTGCTGAGGCAGAGACTTTGCTTTCAGCCACTCTGATACATGAGGTTATGCATGTTCTTGGTTTTGATCCACATGCCTTTGCTCATTTTAGAGATGAAAGGAAAAGACGGCGTAATCAGGTTACTGAACAAGTTATGGATGAAAAGCTTGGACGAATGGTAACACGTGTGGTGCTTCCTCGTGTTGTCATGCATTCTCGATATCATTATGCGGCTTTCTCAGGAAATTTTTCTGGTTTAGAGCTGGAAGATGGTGGAGGACGTGGCACATCAGGGTCTCACTGGGAAAAAAGGCTTCTTATGAATGAGATTATGACTGGTTCTGTGGATACAAAATCTGTTGTTTCAAAAATGACATTAGCTCTATTAGAAGATAGTGGATGGTACAAGGCCAATTATAGTATGGCAGACCATCTTGATTGGGGTCGCAACCAAGGTACTGAGTTTGTTACCTCCCCTTGCAATCTATGGAAGGGAGCCTATCGTTGCAACACAACACTGTTTTCTGGTTGTACATATAACAGGGAGGCAGAGGGATACTGCCCCATCCTAACTTATAGTGGAGATCTCCCTCAGTGGGCTCGGTATTTTCCACAAGCTAATAAGGGTGGACAATCCTCATTGGCTGATTATTGCACTTACTTTGTTGCTTACTCTGATGGTTCGTGTACAGACACTAACAGTGCACGAGCACCTGACAGAATGCTAGGTGAAGTCAGAGGAAGTAACTCTAGGTGTATGGCTTCATCACTAGTACGCACAGGCTTTGTACGAGGTTCTATGACCCAGGGAAATGGTTGTTATCAGCACAGGTGTATCAACAATTCTTTAGAGGTTGCTGTGGATGGTATCTGGAAAGTGTGTCCTCAAGCTGGTGGACCCATTCAGTTCCCTGGCTTTAATGGTGAATTAATCTGCCCTGCTTACCCCGAGCTCTGTAACACTGACCCAGTAGCTGTGTCTGGTCAATGCCCTAATTCATGTAATTCCAATGGAGATTGTGTTGATGGAAAATGCCGATGCTTTCTTGGATTTCATGGGAATGATTGCAGTAGACGTTCCTGCCCCAGCAAATGCAATGGCAATGGTGTGTGCCTTTCCAATGGGATTTGTGAATGTAAACCTGGCTACACTGGCATTGACTGCTCCACTGCTGTGTGTGATGAGCAATGCAGCCTTCATGGTGGGGTTTGTGATAATGGAGTTTGTGAATTCCGCTGTTCTGACTATGCGGGATACACATGCCAGAATAGCTCCATGCTCCTGCCTAGCCTTTCGGTGTGCAAAAATGTGCCTGGAAATGATATTTCTGGACAGCATTGTGCACCCAGTGAGCCTAGCATACTACAGCAACTGGAAGAGGTTGTTGTCATACCCAACTACCACCGACTATTCCCTGGTGGTGCTAGAAAATTATTTAATATATTTGGCAGCTCCTACTGTGACGAGACTGCTAAACGGCTTGCCTGCTGGATCTCAATCCAGAAGTGTGACAAGGATGGAGACAACAGGCTTCGAGTGTGCCATTCTGCATGCCAATCTTATAATCTAGCATGTGGAGCTTCTCTTGACTGCTCTGATCAGACGCTTTTCAGCAGTGACGGGGAAGGGGAGGGTCAATGCACCGGCTCGGGTGAGATGAAATTGTCATGGTTTAATCGTCTGCGAAGCAGTTTTTCTTTGAGAAATAGTTCCTTGAAAGGAATATCTGTAAAATATAGGCAGCTATAA 2580 0.4609 MELTVRCTSCALSRFHCKLRFAVVVFEIILILAWVEAHNAKPQEHQLQWGGLERNTENIASHSCIHDQILDQRKRPGRKVYSITPQVYEPVRLKHLQHKGRTLLDVPTSSRPQEDAKKPIRIYLNYDAVGHSPDRDCRAIGNIVKLGEPPMTSPGFPSCDPHGNPPILGDCWYNCTSEDISGDDKKRRLRKALGQTADWFRRALAVEPVKGNLRLSGYSACGQDGGVQLPRGYIEEGVSDADLVLLVTTRPTTGSTLAWAVACERDQWGRAIAGHVNVAPRHLTAEAETLLSATLIHEVMHVLGFDPHAFAHFRDERKRRRNQVTEQVMDEKLGRMVTRVVLPRVVMHSRYHYAAFSGNFSGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTKSVVSKMTLALLEDSGWYKANYSMADHLDWGRNQGTEFVTSPCNLWKGAYRCNTTLFSGCTYNREAEGYCPILTYSGDLPQWARYFPQANKGGQSSLADYCTYFVAYSDGSCTDTNSARAPDRMLGEVRGSNSRCMASSLVRTGFVRGSMTQGNGCYQHRCINNSLEVAVDGIWKVCPQAGGPIQFPGFNGELICPAYPELCNTDPVAVSGQCPNSCNSNGDCVDGKCRCFLGFHGNDCSRRSCPSKCNGNGVCLSNGICECKPGYTGIDCSTAVCDEQCSLHGGVCDNGVCEFRCSDYAGYTCQNSSMLLPSLSVCKNVPGNDISGQHCAPSEPSILQQLEEVVVIPNYHRLFPGGARKLFNIFGSSYCDETAKRLACWISIQKCDKDGDNRLRVCHSACQSYNLACGASLDCSDQTLFSSDGEGEGQCTGSGEMKLSWFNRLRSSFSLRNSSLKGISVKYRQL* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0300 859 Pfam EGF-like domain 638 665 IPR013111 -
Gso4g0300 859 Gene3D Leishmanolysin domain 4 501 594 - -
Gso4g0300 859 Gene3D - 113 302 - -
Gso4g0300 859 PRINTS Leishmanolysin (M8) metalloprotease family signature 247 276 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Gso4g0300 859 PRINTS Leishmanolysin (M8) metalloprotease family signature 400 429 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Gso4g0300 859 PANTHER LEISHMANOLYSIN-LIKE PEPTIDASE 1 831 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Gso4g0300 859 ProSitePatterns EGF-like domain signature 2. 654 665 IPR000742 -
Gso4g0300 859 Gene3D - 595 637 - -
Gso4g0300 859 Gene3D Leishmanolysin , domain 2 312 437 - -
Gso4g0300 859 ProSitePatterns EGF-like domain signature 1. 654 665 IPR000742 -
Gso4g0300 859 Gene3D Leishmanolysin domain 3 440 499 - -
Gso4g0300 859 SMART egf_5 637 666 IPR000742 -
Gso4g0300 859 SMART egf_5 595 634 IPR000742 -
Gso4g0300 859 ProSiteProfiles EGF-like domain profile. 634 666 IPR000742 -
Gso4g0300 859 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 115 603 - -
Gso4g0300 859 Pfam Leishmanolysin 173 598 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Gso4g0300 859 Gene3D Laminin 638 668 - -
Gso4g0300 859 PANTHER METALLOENDOPEPTIDASE/ZINC ION-BINDING PROTEIN 1 831 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0300 Gso-Chr4 2720585 2728361 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0300 4 2720585 2728361 Gso4g0300 4 2720585 2728361 ECH
Gso4g0300 4 2720585 2728361 Gso6g0284 6 2656607 2665699 GST
Gso14g0654 14 6498380 6506684 Gso4g0300 4 2720585 2728361 PCT
Gso17g2100 17 40712498 40720580 Gso4g0300 4 2720585 2728361 PCT
Gso4g0300 4 2720585 2728361 Gso14g0654 14 6498380 6506684 PCT
Gso4g0300 4 2720585 2728361 Gso17g2100 17 40712498 40720580 PCT