Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0297 ATGACTTCGGACGGAGCAACGTCGGCGGCGACTAACCGGAGGAAGCCGTCTTGGAGGGAGAGGGAGAACAACCGGAGGAGAGAGAGAAGAAGGAGAGCCATTTCGGCGAAGATATACTCCGGTCTTAGGGCGCAAGGGAACTACAATTTGCCCAAACACTGCGACAACAACGAAGTCTTGAAGGCTCTCTGCGCTGAAGCTGGTTGGGCCGTCGAAGAAGACGGCACCACCTATCGCAAGGGATGCAGGGCACCATATCCAGGTGATGGTGTAGGCACCTCCACCAGAAACACTCCTTTCTCATCACAAAATCCAAGTCCTCTTTCGTCGTCATTTCCGAGTCCAATTCCTTCATATCAAGTGAGCCCTTCCTCCTCCTCTTTCCCGAGCCCTTCTCGTTTGGATGCAAACAACCCTTCAAACCTGATTCCATATATTCGGCATGCGTTTCCTGCGTCTGTCCCTCCTTTAAGGATATCAAACAGCGCCCCTGTGACCCCACCCCTGTCCTCGCCAACTTCCAGAAACCCCAAACCAATTCCCACATGGGATTCCATTGCCAAAGCCTCCATGGCATCATCCTTCAACCACAGCCACCATCCTTTCTTTGCGGCTTCAGCACCGGCTAGCCCCACACACCGCCACCTTTATGCCCCACCCACTATTCCGGAGTGTGATGAGTCTGATACCTCCACTGTTGAGTCTGGTCAGTGGCTGAACTTCCAAGCATTTGCCCCTTCTGTTTCTCCTGTGCCTATCTCTCCCACCATGAATTTTATCAAACCTGTTGTGAGTCAGCAGCACAAGCACAACCTCAATCTCCCTGGTAATGGAATCCAAGAGATGAGAATTTCGGAGCCCGAATTTGCGATGCAGGTGAAGCCTTGGGTTGGGGAGAGGATTCATGAAGTGGGATTGGATGATTTGGAACTCACACTTGGAAGTGGGAAGACGCCTGCTTAG 963 0.5234 MTSDGATSAATNRRKPSWRERENNRRRERRRRAISAKIYSGLRAQGNYNLPKHCDNNEVLKALCAEAGWAVEEDGTTYRKGCRAPYPGDGVGTSTRNTPFSSQNPSPLSSSFPSPIPSYQVSPSSSSFPSPSRLDANNPSNLIPYIRHAFPASVPPLRISNSAPVTPPLSSPTSRNPKPIPTWDSIAKASMASSFNHSHHPFFAASAPASPTHRHLYAPPTIPECDESDTSTVESGQWLNFQAFAPSVSPVPISPTMNFIKPVVSQQHKHNLNLPGNGIQEMRISEPEFAMQVKPWVGERIHEVGLDDLELTLGSGKTPA* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0297 320 MobiDBLite consensus disorder prediction 14 29 - -
Gso4g0297 320 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 1 318 - -
Gso4g0297 320 MobiDBLite consensus disorder prediction 78 133 - -
Gso4g0297 320 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 318 IPR033264 GO:0003700|GO:0006351|GO:0009742
Gso4g0297 320 MobiDBLite consensus disorder prediction 91 133 - -
Gso4g0297 320 Pfam BES1/BZR1 plant transcription factor, N-terminal 12 137 IPR008540 -
Gso4g0297 320 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0297 Gso-Chr4 2673675 2675720 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Gso4g0297 BES1_N 2.2e-59 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0297 4 2673675 2675720 Gso4g0297 4 2673675 2675720 ECH
Gso4g0297 4 2673675 2675720 Gso6g0281 6 2606169 2608115 GST
Gso14g0651 14 6448529 6452856 Gso4g0297 4 2673675 2675720 PCT
Gso17g2104 17 40766619 40769362 Gso4g0297 4 2673675 2675720 PCT
Gso4g0297 4 2673675 2675720 Gso14g0651 14 6448529 6452856 PCT
Gso4g0297 4 2673675 2675720 Gso17g2104 17 40766619 40769362 PCT