Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0268 ATGATGAAGCGTCGGTTCCTTTTGGTTCTCTTGGTTCTCTATGTCACAGTGGAGTTCTACGTAGAAGCAGATGGTAGTGTTGGGTTTGTGAGAACAAGAGGAGTGCAGCTTATGCTGAATGGGAGCCCCTACTATGCTAATGGCTTTAATGCCTATTGGCTAATGTATCTTGCCTCTGATCCTTCTCAGAGAAACAAAGTCTCATCAGTGTTTCAACAGGCTTCAAATCATGGCCTCAACATTGCCAGAACTTGGGCTTTCAGTGATGGTGGATATCAACCACTACAATACTCTCCTGGATCTTACAATTACCAAATGTTTCAGGGATTGGATTTTGCAATAGCCGAAGCAAGAAAATATGGGATCAAGATGGTGTTGAGTTTGGTGAATAACTATGAGAACATGGGTGGGAAGAAGCAATATGTGGAATGGGCAAAGAGTCAGGGGCAGTCCATAAATTCTGAGGATGACTTTTTCACAAATCCTGTTGTGAAGGGATACTACAAAAACCACATCAAGGCTGTACTTACAAGACGTAATAGCATCACTGGAGTTGCTTACAAAGACGACCCAACTATAATGGCTTGGGAACTTATGAATGAGATTAGGTGCCCTTCTGATCAATCAGGAAGGACAGTTCAGGCTTGGATCACTGAGATGGCATCTTACCTGAAATCCATAGATGGAAACCACTTGCTGGAAGCTGGTCTGGAGGGTTTCTACGGCCAGTCAAAGCCTCAGTCTAACCCAAACTTCAATGTAGGAACCGATTTCATTGCCAACAACCAAATCCCAGGCATTGATTTCGCAACAGTGCACTCCTACCCGGACCAATGGCTATCAAGTTCTAGTTATGAGGACCAAATCTCATTTTTAGGCCGTTGGCTGGATGAGCACATCCAAGATGCACAGAACACCCTTCACAAGCCACTTCTATTTGCGGAGTTTGGTATTTCCACAAAGAGTTATGGTGGCAACTCAACACCAAGGGATCGGTTATTCAACACAGTATATTCTGCAATATACTCATCAGCAAGCAGTGGCGGGGCTGCTGTTGGTGGCTTGTTTTGGCAACTTATGGTTCAAGGAATGGATTCTTATCGAGACGGTTACGAAGTTGTCTTAGATGAGAGCCCTTCAACGGCTAATTTGATCGCTCAAGAGTCTCAAAAACTAAACCGAATTCGCAAGATGTACGCCAGACTTAGAAACATTGAGAAGTGGAATGAAGCTAAGCAAATTAGAGGTGGAAACTGA 1257 0.4383 MMKRRFLLVLLVLYVTVEFYVEADGSVGFVRTRGVQLMLNGSPYYANGFNAYWLMYLASDPSQRNKVSSVFQQASNHGLNIARTWAFSDGGYQPLQYSPGSYNYQMFQGLDFAIAEARKYGIKMVLSLVNNYENMGGKKQYVEWAKSQGQSINSEDDFFTNPVVKGYYKNHIKAVLTRRNSITGVAYKDDPTIMAWELMNEIRCPSDQSGRTVQAWITEMASYLKSIDGNHLLEAGLEGFYGQSKPQSNPNFNVGTDFIANNQIPGIDFATVHSYPDQWLSSSSYEDQISFLGRWLDEHIQDAQNTLHKPLLFAEFGISTKSYGGNSTPRDRLFNTVYSAIYSSASSGGAAVGGLFWQLMVQGMDSYRDGYEVVLDESPSTANLIAQESQKLNRIRKMYARLRNIEKWNEAKQIRGGN* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0268 418 Pfam Cellulase (glycosyl hydrolase family 5) 62 328 IPR001547 GO:0004553|GO:0071704
Gso4g0268 418 Coils Coil 385 405 - -
Gso4g0268 418 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE-LIKE PROTEIN 5 415 - -
Gso4g0268 418 PANTHER - 5 415 IPR045053 GO:0004553
Gso4g0268 418 SUPERFAMILY (Trans)glycosidases 29 384 IPR017853 -
Gso4g0268 418 Gene3D Glycosidases 26 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0268 Gso-Chr4 2454216 2458679 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0268 4 2454216 2458679 Gso4g0268 4 2454216 2458679 ECH
Gso4g0268 4 2454216 2458679 Gso6g0247 6 2386971 2391314 GST
Gso14g0620 14 6089080 6094232 Gso4g0268 4 2454216 2458679 PCT
Gso17g2133 17 41024122 41028068 Gso4g0268 4 2454216 2458679 PCT
Gso4g0268 4 2454216 2458679 Gso14g0620 14 6089080 6094232 PCT
Gso4g0268 4 2454216 2458679 Gso17g2133 17 41024122 41028068 PCT