Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0252 ATGGATACCATTGCCAATTCAGTTTCGAAGCTACTCACATTGTTTCTCACGGTCTTGTTTGTGGGTTCTGAGCTGACACACTGTAATGTCACCTACGACAGAAAGTCTCTTCTCATCAATGGCCAGAGGAGAATCCTCATCTCTGGCTCCATTCACTATCCCAGAAGCACCCCTGAGATGTGGGAGGATCTAATTTGGAAGGCCAAACACGGAGGACTTGATGTCATAGACACTTATGTCTTCTGGGATGTCCATGAACCTTCTCCTGGCAATTACGATTTTGAAGGAAGGTATGATCTAGTACGGTTCATTAAGACGGTGCAGAAGGTGGGGCTTTATGCCAATCTTCGGATTGGACCTTATGTATGCGCTGAGTGGAACTTTGGAGGAATTCCTGTATGGTTGAAGTATGTTCCTGGCGTAAGCTTCAGAACGGATAATGAGCCTTTCAAGGCGGCAATGCAAGGTTTCACGCAGAAAATTGTCCAGATGATGAAGAGTGAGAAGTTGTTTCAATCTCAGGGTGGTCCAATCATTCTCTCTCAGATTGAGAATGAGTACGGGCCAGAGAGTAGGGGAGCTGCTGGCCGTGCATATGTAAACTGGGCTGCAAGTATGGCTGTTGGATTGGGTACAGGAGTGCCATGGGTGATGTGCAAGGAAAATGATGCCCCAGATCCTGTGATAAATTCATGTAATGGTTTTTACTGTGATGATTTCTCTCCAAATAAACCATACAAGCCTAGCATGTGGACCGAGACTTGGAGTGGCTGGTTTACAGAATTTGGCGGCCCAATTCACCAGCGACCAGTTGAGGATCTATCCTTTGCAGTTGCTCGTTTCATACAAAAGGGTGGCTCATATGTGAATTATTACATGTACCATGGAGGAACTAACTTTGGACGATCAGCTGGAGGCCCATTCATAACTACAAGCTATGACTATGATGCTCCAATTGATGAATATGGTTTGATCAGGCAACCAAAATATAGTCATTTGAAGGAGCTTCATAAAGCTATCAAGCGATGTGAACATGCTTTGGTGTCTTTGGATCCCACAGTTTTGTCATTAGGAACACTACTGCAGGCTCATGTATTCTCTTCAGGAACTGGAACATGTGCAGCTTTTCTAGCAAACTATAATGCACAGTCAGCTGCTACAGTGACATTCAATAACAGGCACTATGATTTACCTCCTTGGTCCATAAGCATCCTTCCTGATTGCAAAATTGATGTATTTAATACTGCAAAAGTGAGAGTTCAACCTTCACAGGTGAAAATGCTTCCTGTCAAACCAAAGTTGTTCTCCTGGGAGAGCTATGATGAAGATCTATCTTCTCTGGCCGAAAGTTCAAGGATTACAGCTCCTGGACTCTTAGAACAGCTGAACGTTACTAGAGATACCAGTGACTATCTATGGTACATAACCAGCGTTGACATAAGTTCATCAGAATCCTTTCTTCGAGGCGGACAAAAACCCAGCATTAATGTGCAGTCTGCAGGACATGCTGTTCATGTGTTTGTTAATGGGCAATTTTCAGGGTCGGCTTTCGGGACAAGGGAGCAGAGAAGTTGCACATATAATGGACCTGTTGACCTACGCGCTGGAGCAAATAAAATTGCTCTTCTCAGCGTGACTGTTGGATTACAGAATGTTGGTCGGCATTATGAAACATGGGAGGCAGGGATCACTGGTCCAGTTTTGCTCCATGGTCTTGACCAAGGACAGAAAGATTTGACGTGGAACAAGTGGTCATATAAGGTTGGCCTAAGAGGAGAGGCTATGAATTTGGTATCTCCCAATGGAGTCTCGTCTGTTGACTGGGTCCAAGAGTCACAAGCTACTCAAAGCCGGTCACAATTAAAATGGTACAAGGCATATTTTGATGCACCCGGGGGAAAGGAACCACTGGCTTTGGACCTTGAAAGCATGGGTAAGGGTCAAGTATGGATAAACGGGCAGAGCATAGGGAGATATTGGATGGCTTATGCAAAGGGTGACTGTAATTCTTGCACTTATTCTGGGACCTTTCGGCCTGTAAAGTGCCAACTTGGCTGTGGACAACCCACTCAACGATGGTATCACGTTCCAAGGTCCTGGCTGAAGCCAACAAAGAACTTGATAGTAGTGTTTGAAGAATTAGGTGGAAATCCTTGGAAAATATCTTTGGTAAAGAGAGTGGCACATACTCCGGCAGTTCATGGGCAGTGA 2211 0.4487 MDTIANSVSKLLTLFLTVLFVGSELTHCNVTYDRKSLLINGQRRILISGSIHYPRSTPEMWEDLIWKAKHGGLDVIDTYVFWDVHEPSPGNYDFEGRYDLVRFIKTVQKVGLYANLRIGPYVCAEWNFGGIPVWLKYVPGVSFRTDNEPFKAAMQGFTQKIVQMMKSEKLFQSQGGPIILSQIENEYGPESRGAAGRAYVNWAASMAVGLGTGVPWVMCKENDAPDPVINSCNGFYCDDFSPNKPYKPSMWTETWSGWFTEFGGPIHQRPVEDLSFAVARFIQKGGSYVNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLIRQPKYSHLKELHKAIKRCEHALVSLDPTVLSLGTLLQAHVFSSGTGTCAAFLANYNAQSAATVTFNNRHYDLPPWSISILPDCKIDVFNTAKVRVQPSQVKMLPVKPKLFSWESYDEDLSSLAESSRITAPGLLEQLNVTRDTSDYLWYITSVDISSSESFLRGGQKPSINVQSAGHAVHVFVNGQFSGSAFGTREQRSCTYNGPVDLRAGANKIALLSVTVGLQNVGRHYETWEAGITGPVLLHGLDQGQKDLTWNKWSYKVGLRGEAMNLVSPNGVSSVDWVQESQATQSRSQLKWYKAYFDAPGGKEPLALDLESMGKGQVWINGQSIGRYWMAYAKGDCNSCTYSGTFRPVKCQLGCGQPTQRWYHVPRSWLKPTKNLIVVFEELGGNPWKISLVKRVAHTPAVHGQ* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0252 736 SUPERFAMILY Galactose-binding domain-like 581 724 IPR008979 -
Gso4g0252 736 Pfam Beta-sandwich domain in beta galactosidase 347 418 IPR041392 -
Gso4g0252 736 PANTHER BETA-GALACTOSIDASE 3 735 - -
Gso4g0252 736 SUPERFAMILY Galactose-binding domain-like 402 573 IPR008979 -
Gso4g0252 736 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 175 187 IPR019801 GO:0004553|GO:0005975
Gso4g0252 736 PRINTS Glycosyl hydrolase family 35 signature 40 57 IPR001944 GO:0004553|GO:0005975
Gso4g0252 736 PRINTS Glycosyl hydrolase family 35 signature 61 79 IPR001944 GO:0004553|GO:0005975
Gso4g0252 736 PRINTS Glycosyl hydrolase family 35 signature 116 135 IPR001944 GO:0004553|GO:0005975
Gso4g0252 736 PRINTS Glycosyl hydrolase family 35 signature 173 188 IPR001944 GO:0004553|GO:0005975
Gso4g0252 736 PRINTS Glycosyl hydrolase family 35 signature 250 265 IPR001944 GO:0004553|GO:0005975
Gso4g0252 736 PRINTS Glycosyl hydrolase family 35 signature 287 302 IPR001944 GO:0004553|GO:0005975
Gso4g0252 736 PRINTS Glycosyl hydrolase family 35 signature 307 323 IPR001944 GO:0004553|GO:0005975
Gso4g0252 736 PRINTS Glycosyl hydrolase family 35 signature 619 633 IPR001944 GO:0004553|GO:0005975
Gso4g0252 736 PRINTS Glycosyl hydrolase family 35 signature 646 662 IPR001944 GO:0004553|GO:0005975
Gso4g0252 736 Gene3D - 438 586 - -
Gso4g0252 736 Gene3D Glycosidases 23 343 - -
Gso4g0252 736 SUPERFAMILY (Trans)glycosidases 27 344 IPR017853 -
Gso4g0252 736 Gene3D - 594 730 - -
Gso4g0252 736 Pfam Glycosyl hydrolases family 35 36 339 IPR031330 -
Gso4g0252 736 PANTHER BETA-GALACTOSIDASE RELATED 3 735 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0252 Gso-Chr4 2312327 2317730 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0252 4 2312327 2317730 Gso4g0252 4 2312327 2317730 ECH
Gso14g0606 14 5914937 5921395 Gso4g0252 4 2312327 2317730 PCT
Gso17g2150 17 41164717 41171078 Gso4g0252 4 2312327 2317730 PCT
Gso4g0252 4 2312327 2317730 Gso14g0606 14 5914937 5921395 PCT
Gso4g0252 4 2312327 2317730 Gso17g2150 17 41164717 41171078 PCT