Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0246 ATGGCTGATTCAGGCTCAGCCTATTCTTCCAGAATGTGGTGCTCCATCCCCGAACGGGTTCAGCTGCATGCGGCCATGTTGGCCCTGCAGTTTGGCTATGCTGGCTTTCATGTGGTCTCAAGAGCTGCCCTTAACATGGGCATTAGCAAACTTGTTTTCCCAGTCTACCGCAACATTATTGCTTTTCTCCTCCTCCTTCCTTTTGCCTACTTCTTGGAAAAGAAGGAGAGACCTGCCATTACTTTAAACTTCCTCTTACAGTTCTTTCTTCTGGCACTTGTCGGGATTACAGCGAACCAAGGTTTTTACTTGCTTGGCTTGGACAACACATCCCCAACCTTTGCATCAGCGATTCAGAACTCTGTCCCAGCCATTACATTTCTCATGGCAGTCATACTCAGGATAGAGCAAGTGAGGCTGAACAGAAAGGATGGGATAGCGAAGGTGGCGGGAACGATATTCTGTGTGGCTGGGGCGACGGTGATTACACTATACAAGGGTCCAACAATATATAGCCCAAGTCCACCTCTACAGAGTGAGAGCTCAGTAGTAGTTGAGTTTGGGACACTCTCATCACTGGGAGATGCAAAGGGGAAGAACTGGACCCTTGGGTGCCTCTACCTCATAGGGCATTGCTTGTCCTGGTCTGCTTGGCTTGTGCTCCAAGCACCTGTACTCAAGAAGTACCCAGCTCGCCTCTCTGTCACTTCCTATACATGTTTCTTTGGACTCATCCAATTCCTTGTCATTGCTCTCATCGTTGAAAGAGATGCTCAGGCTTGGATTTTCCAATCTGGTGGAGAAGTTTTCACTATTTTATATGCGGGAGTGGTGGCATCTGGAATTGCCTTCGCTGTACAGATATGGTGCATTGACAGAGGTGGCCCTGTGTTCGTTGCGGTGTATCAGCCTGTTCAAACTCTTGTTGTCGCTATTATGGCTTCCCTTGCTTTAGGCGAAGAGTTCTACTTGGGCGGGATCATAGGAGCAGTGTTGATCGTTGTGGGACTGTACTTTGTCTTGTGGGGTAAAAGCGAAGAGAGAAAGTTTGCAAAGGAACATGCTGCAATTACGTCTACTCCAGAGCACAGTGGTATCAGGTCCTCAAGCCATGCCAAAACATTACTCACTCAGCCACTTCTCCCTTCATCTACGGAGAATGTCTGA 1167 0.4824 MADSGSAYSSRMWCSIPERVQLHAAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAITLNFLLQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAVILRIEQVRLNRKDGIAKVAGTIFCVAGATVITLYKGPTIYSPSPPLQSESSVVVEFGTLSSLGDAKGKNWTLGCLYLIGHCLSWSAWLVLQAPVLKKYPARLSVTSYTCFFGLIQFLVIALIVERDAQAWIFQSGGEVFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASLALGEEFYLGGIIGAVLIVVGLYFVLWGKSEERKFAKEHAAITSTPEHSGIRSSSHAKTLLTQPLLPSSTENV* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0246 388 PANTHER WAT1-RELATED PROTEIN 14 355 IPR030184 GO:0016021|GO:0022857
Gso4g0246 388 PANTHER WAT1-RELATED PROTEIN 14 355 - -
Gso4g0246 388 Pfam EamA-like transporter family 26 163 IPR000620 GO:0016020|GO:0016021
Gso4g0246 388 Pfam EamA-like transporter family 203 341 IPR000620 GO:0016020|GO:0016021
Gso4g0246 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
Gso4g0246 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0246 Gso-Chr4 2274966 2278340 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0246 4 2274966 2278340 Gso4g0246 4 2274966 2278340 ECH
Gso4g0246 4 2274966 2278340 Gso6g0225 6 2183753 2187037 GST
Gso14g1823 14 50579681 50584436 Gso4g0246 4 2274966 2278340 PCT
Gso17g2156 17 41216294 41220563 Gso4g0246 4 2274966 2278340 PCT
Gso4g0246 4 2274966 2278340 Gso14g1823 14 50579681 50584436 PCT
Gso4g0246 4 2274966 2278340 Gso17g2156 17 41216294 41220563 PCT