Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0224 ATGGATCGACGCTGGCCTTGGAAGAAAAAATCATCTGAAAAGTCCGTGATTGAGAAAGCAACTACTGCATTGGATTCCTCCGATGCTTCTAACAACCAGGATAACAAGAAGAAACCAAACTATGTTCAAATTTCTGTGGAATCCTATTCACATCTGTCTGGTTTGGAAGATCAAGTGAAGACATATGAGGAAAAAGTTCAGACACTGGAAGATGAGATAAAGGAAATGAATGAAAAGCTGTCCGCAGCAAACTCTGAGATCAATACCAAGGAAAGCATGGTAAAGCAACATGCTAAAGTGGCTGAAGAAGCTGTATCAGGCTGGGAAAAGGCTGAAGCTGAAGCTTTGGCATTGAAGAACCATCTAGAATCTGTCACCCTTTTAAAACTCACTGCTGAGGATCGCGCAACGCATTTAGATGGTGCTCTTAAAGAGTGTATGCGACAAATAAGAAACCTTAAGGAAGAACATGAGCAGAAAATACAGGAAGTTGCTCTCTCAAAAACCAAGCAATTAGACAAGATTAAGGGGGAGCTGGAGGCAAAGATAGTGAACTTCGAACAGGAACTTCTTAGATCTGCTGCTGAAAATGGGGCCCTGTCAAGGTCATTGCAGGAATGCTCAAACATGCTAATCAAATTAAGTGAAGAAAAGGCTCATGCCGAGGCTGAAATTGAGCTTCTTAAGGGAAACATAGAAGCATGTGAAAAGGAAATTAATTCACTTAAATATGAACTTCATGTTGTTTCCAAAGAGCTTGAAATTCGCAATGAAGAAAAAAACATGAGTATGAGGTCTGCAGAAGCTGCTAACAAGCAGCATATGGAGGGTGTGAAAAAAATTGCCAAGTTAGAGGCCGAGTGCCAAAGATTACGTGGTCTTGTGAGGAAAAAGTTACCTGGTCCTGCTGCACTTGCACAGATGAAGCTAGAAGTTGAAAGCCTTGGCCGAGATTTTGGAGAAAGTCGATTAAGGAAGTCTCCTGTGAAGCCTGCTACCCCTAATTTGTCTCCATTACCTGATTTCTCCTTGGAGAATGTACAGAAATTCCAGAAGGACAATGAATTTCTTACAGAGCGTTTATTGGCAATGGAAGAAGAAACAAAGATGCTGAAAGAAGCTTTGGCTAAGCGTAACAGTGAGTTGCAGGCCTCAAGGAGTATGTGTGCTAAAACACTGAGCAAACTTCAAAGTTTGGAAGCACAATCTCAGACAAGTAACCAGCTGAAATTATCTCCAAAATCCATCGTCCAGTTAACTCATGAAAGCATTTATAATCAAAATGCAAGCAGTGCACCAAGCTTGGTCTCCATGTCTGAAGATGGAAATGACGATGCAGCAAGTTGTGCTGAATCTTGGTCGACAGCAATAGTCTCTGGGCTATCCCAATTTCCTAGAGAAAAGTGCAATGAGGAATCAAACAAATCTGAAGTCACTAACAAGTTGGAACTAATGGATGACTTTCTGGAGGTGGAGAAGTTGGCTCGTTTGTCAAATGATTCCAATGTAGATGCCACTGTTTCAAACAATAAGACAACAGACATTGTGACCGGTGATGTATCAGAAGTCTGTACTGGCAAAGAAGGTCTGTCTGAAAAAAATGGCAATTCAGATCCGCTGCCAAATCAAGTGTCTTCTGATCCTTTGATGTCAGCACCTGATTTTCAATCTGATCTTAGTGGCTTATTATTAACAGAACTTAGATCAAGAATATTACTGGTTTTTGAGTCCTTAGCTAAGGATGCTGACATAGGGAAGATTGTGGAGGATATTAAACATGTGCTTGAAGATTCGCATGACACTACCATCCACCACTCTGTGGATGCCCATCCTTCTGACGCTACATGTGATAGGAAGGATAATCCTGAAGATGCTGGCTTAAACCTTGAAAAGGAAGTCATTTCATCCCAGCAACCCAAAGGATATGTGCAGATAACTTCAGATTTGGAAGCTGCAATTTCTCAGATTCATGACTTTGTATTGTTCCTTGGCAAGGAAGCAATGACATTCCATGACGATGTATCTTCTGATGGAAATGAAATGAGGCAAAAGATTGAGGAGTTCTCCATCACCTTTAATAAAGTATTATGCAACAATGCAAGTTTGCTACAGTTTGTTCTTGACCTGTCCTATGTTCTAGATAAAGCAAGTGAGTTCAGATTTAATGTCCTTGGCTACAGGGGCACAGAAGCTGAAAGTAGCAGTCCAGATTGCATAGATAAGATTGCTTTGCCTGAAAATAAGTTAGTACATGACAATTCATCTGGAGAAAGATATCAAAATGGTTGTTCCCATATTATCAATCCATGTTCTAATCCCGAGGTTCCCGATGATGGAAATTTGGTCTCAGGCTATAAAGCAGATGCTGCATCACAGAAACTGTCAATAGAGGAGTTTGAAGAATTGAAACTAGAGAAAGAGAAAGTAGTGATTGATTTGTCAAATTGTACAGAAAATCTTGAAATGACAAAGTCTCAATTGCTAGACACGGAGCAACTTCTGGCTGAAGTTAAATCACAATTGGCTTCTGCTCTAAAATCAAAAAGCTTGGCTGAGACACAGCTAAAGTGTGTGGCAGAATCATACAACTCACTTGAAACACGTGCCCAGGTCTTGGAAACTGAGCTGAACCATCTGCAAATCAAGATAGAATCTCTGGAGAATGAACTTCAAGATGAAAAGAGGGCTCATGAAGTTGCTATGGCCAGGAGCAAGGAGCTAGAAGAGCAGTTACAAAGGATTGAGTGCTCGGCAGCTGATGATGACCACAAGACTTCGCATGAGAGAGATTTGACAGCTGCTGCTGAAAAGCTAGCCGAGTGTCAAGAAACCATACTTCTTCTGGGCAAGCAGTTAAATTCTCTACGTCCACAAACTGAGCCAAATGACTCATTGTACAGTAAGATAAATCCAAAAGATGAAGGATTCACAGAAGATGAACATACTACTAATCAAAATTTTCAAGAATTAGGTCAGTTGGAGATGGACAGTTCTACTTCTGCTTTTGTGCAAAGATTGAGTTCGGAGTCCCCCTTGCATTTTTCCAACAGTTTATTTAGCCCTTCGGACAGCGAGTCCACCATTCCAGCCAGATCCCCAGTTCAGCATTCTAAATCAAAACCAAAACACCGACCTACCAAGTCAGCCTCTTGTTCAGTTTCTTCTGCCACTACACCTGAGAAACATGCACGGGGATTTAGTAGATTCTTTTCACCTAAAGGAAAATCCGGTCATTGA 3237 0.4106 MDRRWPWKKKSSEKSVIEKATTALDSSDASNNQDNKKKPNYVQISVESYSHLSGLEDQVKTYEEKVQTLEDEIKEMNEKLSAANSEINTKESMVKQHAKVAEEAVSGWEKAEAEALALKNHLESVTLLKLTAEDRATHLDGALKECMRQIRNLKEEHEQKIQEVALSKTKQLDKIKGELEAKIVNFEQELLRSAAENGALSRSLQECSNMLIKLSEEKAHAEAEIELLKGNIEACEKEINSLKYELHVVSKELEIRNEEKNMSMRSAEAANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVESLGRDFGESRLRKSPVKPATPNLSPLPDFSLENVQKFQKDNEFLTERLLAMEEETKMLKEALAKRNSELQASRSMCAKTLSKLQSLEAQSQTSNQLKLSPKSIVQLTHESIYNQNASSAPSLVSMSEDGNDDAASCAESWSTAIVSGLSQFPREKCNEESNKSEVTNKLELMDDFLEVEKLARLSNDSNVDATVSNNKTTDIVTGDVSEVCTGKEGLSEKNGNSDPLPNQVSSDPLMSAPDFQSDLSGLLLTELRSRILLVFESLAKDADIGKIVEDIKHVLEDSHDTTIHHSVDAHPSDATCDRKDNPEDAGLNLEKEVISSQQPKGYVQITSDLEAAISQIHDFVLFLGKEAMTFHDDVSSDGNEMRQKIEEFSITFNKVLCNNASLLQFVLDLSYVLDKASEFRFNVLGYRGTEAESSSPDCIDKIALPENKLVHDNSSGERYQNGCSHIINPCSNPEVPDDGNLVSGYKADAASQKLSIEEFEELKLEKEKVVIDLSNCTENLEMTKSQLLDTEQLLAEVKSQLASALKSKSLAETQLKCVAESYNSLETRAQVLETELNHLQIKIESLENELQDEKRAHEVAMARSKELEEQLQRIECSAADDDHKTSHERDLTAAAEKLAECQETILLLGKQLNSLRPQTEPNDSLYSKINPKDEGFTEDEHTTNQNFQELGQLEMDSSTSAFVQRLSSESPLHFSNSLFSPSDSESTIPARSPVQHSKSKPKHRPTKSASCSVSSATTPEKHARGFSRFFSPKGKSGH* 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0224 1078 MobiDBLite consensus disorder prediction 1 40 - -
Gso4g0224 1078 Coils Coil 204 287 - -
Gso4g0224 1078 MobiDBLite consensus disorder prediction 956 981 - -
Gso4g0224 1078 MobiDBLite consensus disorder prediction 1 16 - -
Gso4g0224 1078 Coils Coil 820 840 - -
Gso4g0224 1078 Pfam Filament-like plant protein, long coiled-coil 90 960 IPR008587 -
Gso4g0224 1078 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1078 - -
Gso4g0224 1078 Coils Coil 855 917 - -
Gso4g0224 1078 Coils Coil 136 196 - -
Gso4g0224 1078 MobiDBLite consensus disorder prediction 17 40 - -
Gso4g0224 1078 SUPERFAMILY Tropomyosin 786 960 - -
Gso4g0224 1078 MobiDBLite consensus disorder prediction 1017 1034 - -
Gso4g0224 1078 MobiDBLite consensus disorder prediction 526 548 - -
Gso4g0224 1078 PANTHER FILAMENT-PLANT-LIKE PROTEIN 1 1078 - -
Gso4g0224 1078 Coils Coil 347 374 - -
Gso4g0224 1078 Coils Coil 52 93 - -
Gso4g0224 1078 MobiDBLite consensus disorder prediction 1046 1061 - -
Gso4g0224 1078 MobiDBLite consensus disorder prediction 530 548 - -
Gso4g0224 1078 MobiDBLite consensus disorder prediction 1017 1078 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0224 Gso-Chr4 2034784 2040565 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0224 4 2034784 2040565 Gso4g0224 4 2034784 2040565 ECH
Gso4g0224 4 2034784 2040565 Gso6g0203 6 1934506 1940413 GST
Gso14g1838 14 50817488 50823799 Gso4g0224 4 2034784 2040565 PCT
Gso17g2176 17 41460278 41466617 Gso4g0224 4 2034784 2040565 PCT
Gso4g0224 4 2034784 2040565 Gso14g1838 14 50817488 50823799 PCT
Gso4g0224 4 2034784 2040565 Gso17g2176 17 41460278 41466617 PCT