Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0222 ATGGAAACTCAACACCAACAACCCACCATCAAGTCTAGGTTCAGACGCATCTGTGTCTACTGTGGTAGCAGCCCTGGCAAAAACCCTAGCTATCAGCTCGCTGCTATTCAGCTCGGAAAACAACTGGTGGAGAGGAACATTGACTTGGTTTATGGAGGGGGAAGCATAGGGTTGATGGGTCTAATCTCACAAGTTGTGTATGATGGTGGACGCCACGTGTTAGGGGTGATTCCAAAGACTCTTAATGCAAAAGAGATAACTGGAGAGAGTGTTGGAGAAGTGAGAGCTGTATCGGGCATGCACCAACGCAAAGCCGAAATGGCCCGACAAGCCGATGCATTTATTGCACTGCCAGGTGGATATGGCACCCTTGAAGAACTACTGGAAATTATCACCTGGGCTCAACTAGGTATCCATGATAAACCGGTGGGGTTGTTGAACGTGGATGGGTACTACAACTCGCTGCTGGCATTCATGGACAAAGCTGTGGACGAAGGTTTCGTAACACCAGCTGCCCGTCACATTATTGTTTCTGCCCACACTGCCCAAGATCTCATGTGCAAACTTGAGGAATATGTCCCCGAGCACTGTGGTGTTGCCCCCAAACTAAGTTGGGAGATGGAGCAACAGTTAGTTAACACTGCAAAGTCAGATATTTCCCGTTGA 666 0.4865 METQHQQPTIKSRFRRICVYCGSSPGKNPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLISQVVYDGGRHVLGVIPKTLNAKEITGESVGEVRAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEIITWAQLGIHDKPVGLLNVDGYYNSLLAFMDKAVDEGFVTPAARHIIVSAHTAQDLMCKLEEYVPEHCGVAPKLSWEMEQQLVNTAKSDISR* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0222 221 Gene3D - 4 191 - -
Gso4g0222 221 SUPERFAMILY MCP/YpsA-like 13 192 - -
Gso4g0222 221 Pfam Possible lysine decarboxylase 59 188 IPR031100 -
Gso4g0222 221 PANTHER LOG FAMILY PROTEIN YJL055W 7 217 - -
Gso4g0222 221 TIGRFAM TIGR00730: TIGR00730 family protein 16 192 IPR005269 GO:0009691|GO:0016787
Gso4g0222 221 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 7 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0222 Gso-Chr4 1995604 1998540 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0222 4 1995604 1998540 Gso4g0222 4 1995604 1998540 ECH
Gso4g0222 4 1995604 1998540 Gso6g0201 6 1889169 1891980 GST
Gso14g1840 14 50845000 50849212 Gso4g0222 4 1995604 1998540 PCT
Gso17g2178 17 41490242 41494797 Gso4g0222 4 1995604 1998540 PCT
Gso4g0222 4 1995604 1998540 Gso14g1840 14 50845000 50849212 PCT
Gso4g0222 4 1995604 1998540 Gso17g2178 17 41490242 41494797 PCT