Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1970 ATGCTCATTGAGATTCAGAGTTGGCTGCGGCAGCCAAAGGTATGGAGGTTTGTGTGTTTTATTTCATCTGTTGTTGGACTGCTCTGTTACGCTCTCAGCTCTTCTTTCAATCATATGTTCGGTAAGTGGAGCTGGTGGAAGATATTACTCTATATTGTTTTTAGTTGTATTATCTGTATTGCTGTCTTGTTTGCAAAGGCATGGGAGTCCTCCAACTCTCTCCGGTTAGAAGCTCACACTGCTTTTTTGGTTTTGATGATCACTTCTGTATACTCATTTTTCGTTGATAAAGTAGTGAAAGGGAAACCAGATGCATGTAGTCTGGTTTCCTGTGCTGCATTTGCTATTATGTCTTTATGTTTGTCAAGACTGTCTCGCTTCGGATTTGAGGTTGATCTCCTATATTTTTTCAGCAGTCTTCTAACTATACAACTCATGAAAATAAAAGTATGGTTAGTCTTTGTTGGAGGGTGTTTCAGTTATTCCCTCATTAAACTTCGTTCCACTTTGGACAGTCTACTAATACATGGGGATCTTGTACTCCAAGTCATAGATCAAGACATTGAAAGTGGTTCACTTTCATCAGAAATCAATAGCAGTGCTTCTCAACTGGATTCACCCCAAGCTATTATTACTAGTCCTGGTAATGCTAATGCACTAGCTGGTGCTACTCTAGAAAATAAGGATCTAGCATTCCTAGTCGCTCAAGTCCGTTCAGATTCACACCAAAGCAACAGCAACAGCAATAGTCATGGTGATGATAGGCAATTTTATCCTCTCCTACCTTTCAATCACTCCAGCCTTAAAGACAAAAGTTGGAGACCAGAGAAAATGAATAGAGAATGGGTGCAGCTGCGGGAGCAACGCGCATCCTCTTTAATTGAGCTTCTCGAGAATCAAATAGAGGTGCTTAAGAAGAAGAATGGTAGCATTATTGGCGCAATGTCCAAGCATGTAGACCGATGCCTTAAAACTAATCTTGTTTATGATGACCAGATTCCGGTGCCACAAATAGATCACGATGACAACTTGGTGGTGGATGCTTTGCAATTTGATGATGACGACAATATTGTCGGTGACCTTGGTGCTACTGCGAGGCTGATGGTGATGGCAGGGATTGAGGAGGAATGCTGCAGAGTGTACTGTTGTTGGAGGAGGGAGTTTCTGAATGAGAGTCTCTCCACATTTGGATTACAAGTGCAAGATCTCAACATGGAGGACATTGACAACAAGGAGAAGATTCAGTGTTCGATAAAAGCTTTGAATGTATTTGTTAGGTTACTCTTTCCCAATGAAAGGAGACTCTGTCATCACATCTTTGGAAAGTTCATTTCCTCTGCAGATTTTGCTTTCACGGAGGTTTGCAGGGAATCTGCTACTCGTCTACTGAGCACTGCCGATGCCTTGGCAAATTCCTTCCGCAACACATTTGAGGAGCTGATGTATGAGTTTGAATTAGTGTTTTCTGGTGAGTACAGTAAATCAATAAAAAAGGATGCGCGCAGTGTCCAGAGGAGTTTGGACATTTTTAAAGATTCAGAAAATCTTCTTACTTGTGGAAGTGGTGGACTTCTTCCTATTACACATGAATTGATGAAGTACATTAGTGATAATGCCATAGAAACAAAAAGTCGCCTTAACCAAGCTTCACAGGGAATGCTTTCACCTTCTGTGCAAGTAGCCAGAATAGCAAGGCTGTTCGAGAGGAGTTTGAAAGCTAACTCAAAAAATTACAATAACCCTTCTTTGGGTTATGTTTTCATCCTGAACAATCGGAGCTACATAGACCGACATGTGGATCCGTACGGATTGGGACCTATTGGCTATGATTGGCTCCAAAAAAACAAAAGAAAAATAGAAAAAAACTATAAACTCTATCTGACAAAGTCATGGACTAAGATTTTCAACTTTTTGAAGTTGGACATCAATGAGGCAGAGGCTAATGTTGCGGTCAAGTTAATGACAGACAAGCTCCGTTCCTTCAACCAACACTTTGATGATATATGCAACGATCAGTCTACGTGGCTTGTCTTTGATAAGCAGTTAAGGGAACAAATAATAAAATCCATAGAAAACATCTTGTTGCTAGCATATGGAAACTTCATTGGGAGGTTGCAGGATCTTCTTGGTAATCATGCTAACGAGTACATCAAGTATGGAATGATTGACGTTCAAGATCGACTCAACAATTTGTTTCTTGTAAGGGAGTAG 2211 0.4057 MLIEIQSWLRQPKVWRFVCFISSVVGLLCYALSSSFNHMFGKWSWWKILLYIVFSCIICIAVLFAKAWESSNSLRLEAHTAFLVLMITSVYSFFVDKVVKGKPDACSLVSCAAFAIMSLCLSRLSRFGFEVDLLYFFSSLLTIQLMKIKVWLVFVGGCFSYSLIKLRSTLDSLLIHGDLVLQVIDQDIESGSLSSEINSSASQLDSPQAIITSPGNANALAGATLENKDLAFLVAQVRSDSHQSNSNSNSHGDDRQFYPLLPFNHSSLKDKSWRPEKMNREWVQLREQRASSLIELLENQIEVLKKKNGSIIGAMSKHVDRCLKTNLVYDDQIPVPQIDHDDNLVVDALQFDDDDNIVGDLGATARLMVMAGIEEECCRVYCCWRREFLNESLSTFGLQVQDLNMEDIDNKEKIQCSIKALNVFVRLLFPNERRLCHHIFGKFISSADFAFTEVCRESATRLLSTADALANSFRNTFEELMYEFELVFSGEYSKSIKKDARSVQRSLDIFKDSENLLTCGSGGLLPITHELMKYISDNAIETKSRLNQASQGMLSPSVQVARIARLFERSLKANSKNYNNPSLGYVFILNNRSYIDRHVDPYGLGPIGYDWLQKNKRKIEKNYKLYLTKSWTKIFNFLKLDINEAEANVAVKLMTDKLRSFNQHFDDICNDQSTWLVFDKQLREQIIKSIENILLLAYGNFIGRLQDLLGNHANEYIKYGMIDVQDRLNNLFLVRE* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1970 736 PANTHER PROTEIN, PUTATIVE-RELATED 6 733 - -
Gso2g1970 736 Gene3D Exocyst complex component Exo70 277 736 - -
Gso2g1970 736 PANTHER EXOCYST COMPLEX PROTEIN EXO70 6 733 IPR004140 GO:0000145|GO:0006887
Gso2g1970 736 Coils Coil 287 307 - -
Gso2g1970 736 Pfam Exo70 exocyst complex subunit 417 729 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gso2g1970 736 SUPERFAMILY Cullin repeat-like 354 732 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1970 Gso-Chr2 44061568 44064139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1970 330 732 EXO70 exocyst subunit family AT5G58430 38.739 3.94e-78 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1970 - - gmx:102668498 1447.57