Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1821 ATGCAGAGCGCAACACGCGCCGAGGCGGAGCGTCTCCTGGGGATCGCGGAGAAGCTCCTCCAGAACCGCGATCTGGTGGGGTCTCGAGAGTTCGCCTTCCTCGCCCAGGAAACCGAGCCTCTCCTCGAAGGCTCCGACCAGATCCTGGCCATAGTTGACGTCCTCCTCGCCGCCGACAAGCGCGTCAACAACCACCCCGACTGGTACGCCGTCCTCCAGGTGGACCGCCGCTCCGACGACCTGGACCTGATCAAGAAACAGTACCGCCGCCTTGCCCTCCTCCTCCACCCCGACAAGTCCCGCTTCCACTTCGCCGACCACGCCTTCCAGCTCGTCGCCGATGCGTGGGCCCTACTCTCCGACCCTATTAAGAAATCTGTTTATGACAAGGAGCTCTCTTTCTTCTCCCGCGTCGATTTGTCCGTCCCTGGATGGGTCCAGCAGCAGGAGAAGCTCCCCGTCCGGAGGACTGGGCCTGGGCCCGGTCCCGGTCCCGGGCCCACTGCGGGCCGCAATAGCGCTGCTTCGGCCCGCGAGGACATCCACGCGGACGAGAATTCGAGGAGGAGGAGGAGCTCTACTTTCTGGACCGCGTGTCCTTACTGTTACCGTTTGTATGAGTACCCTAGGGTTTATGAGGGTTGTTGCTTGCGGTGCCAGAATTGTGATAGATCCTTTCACGGCGTAACGGTTCCGTCGCTGCCGCCGCTTGTTCCCGGTCAGGATGCTTATTATTGCTGCTGGGGGTTCTTCCCCATGGGGTTTGTTGTTGGCAGCTTCGGTTCTCCTCCGCAGCCGGAGGAAGAAGCTGCTCCTTCGGCGGCGGAGGCGCCACCGTCACCGCCTCCTCCGCCACAGCAACCGGCTTCTTCGCTGCCTAATTGGATGCCGGTGGCGGCGGAGAATGGCGTGGGGAGTGTGACACCGGTGGCGGCGGCCACCAGGTTGACGAGGTCGGGGGCGGCGGTGCCGAACGGGGTAGGATCGGGGAATGGGACGGGGAAGAAGAAACGGGGGCGGCCGAGGAAGTATCCATTGCCGTCGTGA 1047 0.6332 MQSATRAEAERLLGIAEKLLQNRDLVGSREFAFLAQETEPLLEGSDQILAIVDVLLAADKRVNNHPDWYAVLQVDRRSDDLDLIKKQYRRLALLLHPDKSRFHFADHAFQLVADAWALLSDPIKKSVYDKELSFFSRVDLSVPGWVQQQEKLPVRRTGPGPGPGPGPTAGRNSAASAREDIHADENSRRRRSSTFWTACPYCYRLYEYPRVYEGCCLRCQNCDRSFHGVTVPSLPPLVPGQDAYYCCWGFFPMGFVVGSFGSPPQPEEEAAPSAAEAPPSPPPPPQQPASSLPNWMPVAAENGVGSVTPVAAATRLTRSGAAVPNGVGSGNGTGKKKRGRPRKYPLPS* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1821 348 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Gso2g1821 348 Pfam DnaJ domain 67 129 IPR001623 -
Gso2g1821 348 MobiDBLite consensus disorder prediction 316 348 - -
Gso2g1821 348 SMART dnaj_3 66 124 IPR001623 -
Gso2g1821 348 MobiDBLite consensus disorder prediction 151 187 - -
Gso2g1821 348 SUPERFAMILY Chaperone J-domain 59 132 IPR036869 -
Gso2g1821 348 MobiDBLite consensus disorder prediction 262 297 - -
Gso2g1821 348 MobiDBLite consensus disorder prediction 275 291 - -
Gso2g1821 348 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 343 - -
Gso2g1821 348 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 343 - -
Gso2g1821 348 CDD DnaJ 67 121 IPR001623 -
Gso2g1821 348 PRINTS DnaJ domain signature 69 87 IPR001623 -
Gso2g1821 348 PRINTS DnaJ domain signature 88 103 IPR001623 -
Gso2g1821 348 PRINTS DnaJ domain signature 104 124 IPR001623 -
Gso2g1821 348 Gene3D DnaJ domain 56 139 IPR036869 -
Gso2g1821 348 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1821 Gso-Chr2 42120730 42122360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1821 5 346 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 47.500 4.27e-102 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1821 - - gmx:100816918 639.032