Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1495 ATGGAGCAAACCACTCTCGAAGCCATTCAGTTCAACGAGGAAATCCAAGGTCTCATGGCTGCTCCGGCGCCGGAAACCGCCAATTCCTTCACCGCGCTGCTCGAGCTTCCCCCGACGCAGGCCGTCGAACTCTTCCACTCGCCGGAGCGCGCCGGGAAACCGCCGCGCCACAGTCCCAAATCCTATCCGTTGACCTCCTTCGCCGCCTCCGCATCCGCCCCCGCCACCGCCACCGCCAACGCCAACCTCACCTTTCCCTCCAACGCCGCGCTGATCGATCGCGCCGCCAGGTTCTCCGTCTTCGCCGGCCAGAGCTCGAACTCGAACTCGCCGGAGGTGAAGCGAGAGCTGCCGGAGACCGATTCCAACCCGAGCTCCACTCACGGCGGCGGCGGCGGAGGCTCCGTCTCCGATCTCGCCGTGGAGAACCAGAATCTGAAAACTGCGAAGAGGAAGGAGCGAGAGAAGAAGGTTAAAGCGTCGTCGAAGAAGAGCAAGAGCGTCGCCGCCGCCGACGAGATTTCCGGCGACGGCGAGAAGCTTCCGTACGTTCACGTTCGAGTTCGTCGAGGTCAAGCCACTGATAGCCATAGCTTAGCAGAAAGGGCTAGGAGAGAGAAGATAAATGCTCGGATGAAGCTTTTACAAGAGCTGGTCCCGGGTTGCAACAAGATATCGGGAACGGCATTGGTTCTGGATAAAATCATCAACCATGTGCAATCTCTACAGAATGAAGTGGAGATATTATCAATGAAACTGGCAGCAGTTAACCCAGTAATTGATTTCAACCTCGACAGCTTACTGGCTACTGAAGGAGTGACTCCAATGGACTGTAACTTCCCTCCGACAGTTGCACCTGTCATGTGGCCAGAAATCCCACAGAACGGAAACAGACAACAATATCAGCAACCATGGCCGTTTGATGCACTCCACCAACCCCTTTGGGGGAGGGAAGAAGACAACACTAATTTCATGACTCCAGAAAACTCACTCTTGAGTTATGACTCATCGGCAAATTCAGTATCTCTGCATTCAAATCAGTTGAAGATGGAGCTCTAA 1059 0.5515 MEQTTLEAIQFNEEIQGLMAAPAPETANSFTALLELPPTQAVELFHSPERAGKPPRHSPKSYPLTSFAASASAPATATANANLTFPSNAALIDRAARFSVFAGQSSNSNSPEVKRELPETDSNPSSTHGGGGGGSVSDLAVENQNLKTAKRKEREKKVKASSKKSKSVAAADEISGDGEKLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQNEVEILSMKLAAVNPVIDFNLDSLLATEGVTPMDCNFPPTVAPVMWPEIPQNGNRQQYQQPWPFDALHQPLWGREEDNTNFMTPENSLLSYDSSANSVSLHSNQLKMEL* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1495 352 MobiDBLite consensus disorder prediction 122 144 - -
Gso2g1495 352 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 352 IPR024097 GO:0006355
Gso2g1495 352 Coils Coil 232 252 - -
Gso2g1495 352 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 192 242 IPR011598 GO:0046983
Gso2g1495 352 Coils Coil 136 156 - -
Gso2g1495 352 CDD bHLH_AtBPE_like 182 267 - -
Gso2g1495 352 Pfam Helix-loop-helix DNA-binding domain 196 243 IPR011598 GO:0046983
Gso2g1495 352 MobiDBLite consensus disorder prediction 103 173 - -
Gso2g1495 352 Gene3D - 189 260 IPR036638 GO:0046983
Gso2g1495 352 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 352 - -
Gso2g1495 352 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 190 261 IPR036638 GO:0046983
Gso2g1495 352 SMART finulus 198 248 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1495 Gso-Chr2 29691315 29697755 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1495 2 352 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 47.781 3.48e-94 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gso2g1495 HLH 4.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1495 - - gmx:100799133 625.935