Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1080 ATGACGGACATCACTGACGACATAGCGGAGGAAATCTCCTTCCAGGGCTTCGAAGATGACTGTAAATTGCTAGGGAACCTTCTCAACGACATTCTCCAGAGGGAGGCTGGCTCCACCTTCGTTGACAAGCTCGAAAAAATTCGAGTCCTTTCACAGAGTGCTTGTAATATGAGACAAGCGGGAATGGAGGACTTGGCTGAGATGCTAGAGAAGCAATTGGCTTCAGAGTTATCCAAGATGACGCTGGAAGAAGCTTTGCCCCTTGCTCGTGCCTTTAGCCATCATCTTACTTTGATGGGTATAGCTGAAACCCACCATAGGGTTCGTAAAGGAGGAAATATGGTTCTTGCTGCAAAATCTTGTGATGATATCTTTAACAACCTGTTGCAAGATGGGGTTTCTCCAGATGAGCTTTATAACACAGTGTTCAAGCAGGAGGTTGAAATTGTTCTCACTGCTCATCCCACTCAAATTAACCGTCGTACCTTGCAATACAAACACCTTAAAATTGCTCATCTTTTGGATTATAATGATCGACCTGATCTTAGCCCTGAAGATCGAGATATGTTGATTGAAGATCTGGTGAGAGAGATAACTTCAATATGGCAGACAGATGAACTTAGGCGTTCAAAACCCACACCAGTAGATGAAGCTAGGGCGGGATTGAATATTGTGGAGCAGTCACTCTGGAAAGCTGTTCCTCATTATTTACGTCGAGTTAGCAGCGCTTTAAAGAAGCACACAGGAAAACCACTTCCATTGACTTGCACTCCAATAAAATTTGGATCTTGGATGGGAGGTGATAGAGATGGAAACCCAAATGTGACAGCAAAGGTCACAAAAGATGTTTCACTTCTGTCAAGATGGATGGCGATTGACCTCTACATTCGGGAAGTGGATGGCCTAAGATTTGAGCTATCCATGAACCAGTGCAGTGATAAGTTGTCAGAACTGGCACATGAAATTCTAAAAGGTAATGATGAGGAGGATCACCATGAGCACTGGAATGGATCTATGAGTAGAAGTCAATCAAAACATCCTAATCAACAAGCTTCACCACTTCCAACTAAACTTCCAGCTGGAGCTCATTTACCCTCTTGTGCTCGGCCTGAAGAGGGTGGATCTGAGTATCCCAGACACGTGCCAGGAGCTGATCACAAGCAACCCAATCACAAGGGTGGTGAGACTTCAAGTTCAACTGAGAGCAATGGTGGCAGTCAAAATGTCCGTTCGTCAATACCAATTTCACCAAATTCCAGTTCTTCATTAGTTTCAATGACACGCTCGCCTTCCTTCAACTCTAGTCAACTTGTTGCTCAGAGGAAACTGTTTGCAGAATCCCAAATAGGAAGGACCAGTTTTAAGAGGCTTTTGGAGCCAAAGGTCCCTCAGGTTCCTGGAATTGCTCCTTATAGAGTTGTCCTTGGATATATAAAAGATAAGCTTCAGAGAACTCGTAGACGGTTGGAGCTTCTTATCGAGGATGGTCCATCTGAACATGATCCTATGGATTATTATGAAACAACAGATCAGCTTTTAGAACCTCTTCTCCTTTGTTATGAATCTTTGCAATTATGTGGATCTGGGGTGCTAGCTGATGGTCGACTAGCTGATCTGATTCGAAGAGTTGCTACTTTTGGCATGGTGTTAATGAAGCTTGACTTGCGTCAGGAATCCGGCAGACATGCTGAAACAATTGATGCAATTACGAGGTATTTGGATATGGGTACGTACAGTGAATGGGATGAAGAAAAGAAACTGGACTTCTTAACTAGAGAGTTGAAAGGGAAGAGACCACTGGTTCCTCCCAGTATAGAGGTTGCTCCAGATGTTAGAGAAGTCTTGGATACGTTCCGAACTGCTGCTGAGCTAGGGAGTGATTCATTTGGTGCCTATGTGATCTCTATGGCCTCAAATGCTAGTGATGTCCTTGCAGTAGAGCTTTTGCAGAAGGATGCGCGACTTGCTGTTAGCGGGGAGTTAGGAAGAGCATGTCCTGGTGGAACGCTGCGGGTGGTTCCTCTATTTGAAACTGTGAAGGACCTGAGAGGAGCTGGTTCAGTTATCAGAAAGCTTTTGTCAATAGATTGGTACCGCCAACACATCATTAAAAACCATAATGGGCATCAAGAGGTTATGGTTGGATATTCTGATTCTGGTAAAGATGCCGGGCGCTTCACTGCTGCTTGGGAACTTTACAAAGCTCAGGAGGATGTTGTGGCTGCATGCAATGAGTATGATATTAAGGTTACTCTCTTCCATGGCCGTGGAGGTAGTATTGGCCGCGGTGGTGGCCCAACATATATGGCTATTCAGTCTCAACCACCCGGCTCTGTCATGGGAACCCTTCGTTCAACTGAGCAAGGAGAGATGGTGCAGGCCAAGTTTGGCTTGCCACAGACAGCTGTCAGACAGCTAGAGATATACACAACAGCTGTGCTACTTGCTACCCTTCGTCCACCTCAACCGCCACGTGAAGAAAAATGGCGCAATCTTATGGAAGACATTTCAAAGATCAGCTGCCAATGTTACCGCAATGTAGTGTATGAAAATCCAGAGTTCCTGTCATACTTCCAGGAAGCCACACCTCAATCAGAGCTTGGTTTTCTCAACATCGGCAGCCGCCCCACAAGGCGAAAGAGCTCAACAGGAATTGGACACCTCCGTGCCATTCCTTGGGTGTTTGCATGGACTCAAACCAGGTTTGTTCTTCCAGCCTGGCTTGGAGTTGGAGCAGGCTTGAAAGATGCTTGTGAGAAAGGACAAACTGAAGAGCTAAAGGCCATGTACAGAGAGTGGCCTTTCTTTCAAAGCACAATAGACTTGATTGAGATGGTTTTGGGAAAAGCAGATATTCCTATTGCTAAGCACTATGATGAAGTTCTTGTCTCACAAAAGAGACAAGAACTTGGAAAGCAACTGAGGAATGAACTCATCTCAACTGGCAAGTTTGTTCTAGCGGTTAGTGGGCAGGAGAAACCTCAACAGAATAATAGAAGCTTAAGGAAGCTGATTGAGAGTAGACTTCCCTTTCTGAACCCCATGAATATGTTGCAAGTAGAGATACTCAAGAGGCTAAGATGTGATGATGACAATCTTAAAGCCAGAGATGCCTTGCTTATCACCATAAATGGTATTGCTGCTGGGATGAGGAACACTGGTTAA 3165 0.4493 MTDITDDIAEEISFQGFEDDCKLLGNLLNDILQREAGSTFVDKLEKIRVLSQSACNMRQAGMEDLAEMLEKQLASELSKMTLEEALPLARAFSHHLTLMGIAETHHRVRKGGNMVLAAKSCDDIFNNLLQDGVSPDELYNTVFKQEVEIVLTAHPTQINRRTLQYKHLKIAHLLDYNDRPDLSPEDRDMLIEDLVREITSIWQTDELRRSKPTPVDEARAGLNIVEQSLWKAVPHYLRRVSSALKKHTGKPLPLTCTPIKFGSWMGGDRDGNPNVTAKVTKDVSLLSRWMAIDLYIREVDGLRFELSMNQCSDKLSELAHEILKGNDEEDHHEHWNGSMSRSQSKHPNQQASPLPTKLPAGAHLPSCARPEEGGSEYPRHVPGADHKQPNHKGGETSSSTESNGGSQNVRSSIPISPNSSSSLVSMTRSPSFNSSQLVAQRKLFAESQIGRTSFKRLLEPKVPQVPGIAPYRVVLGYIKDKLQRTRRRLELLIEDGPSEHDPMDYYETTDQLLEPLLLCYESLQLCGSGVLADGRLADLIRRVATFGMVLMKLDLRQESGRHAETIDAITRYLDMGTYSEWDEEKKLDFLTRELKGKRPLVPPSIEVAPDVREVLDTFRTAAELGSDSFGAYVISMASNASDVLAVELLQKDARLAVSGELGRACPGGTLRVVPLFETVKDLRGAGSVIRKLLSIDWYRQHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEYDIKVTLFHGRGGSIGRGGGPTYMAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATLRPPQPPREEKWRNLMEDISKISCQCYRNVVYENPEFLSYFQEATPQSELGFLNIGSRPTRRKSSTGIGHLRAIPWVFAWTQTRFVLPAWLGVGAGLKDACEKGQTEELKAMYREWPFFQSTIDLIEMVLGKADIPIAKHYDEVLVSQKRQELGKQLRNELISTGKFVLAVSGQEKPQQNNRSLRKLIESRLPFLNPMNMLQVEILKRLRCDDDNLKARDALLITINGIAAGMRNTG* 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1080 1054 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 4 8 1054 - -
Gso2g1080 1054 MobiDBLite consensus disorder prediction 393 428 - -
Gso2g1080 1054 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 150 161 IPR018129 -
Gso2g1080 1054 MobiDBLite consensus disorder prediction 340 355 - -
Gso2g1080 1054 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 17 1054 IPR015813 GO:0003824
Gso2g1080 1054 MobiDBLite consensus disorder prediction 328 428 - -
Gso2g1080 1054 Gene3D Phosphoenolpyruvate/pyruvate domain 422 548 - -
Gso2g1080 1054 Gene3D Phosphoenolpyruvate/pyruvate domain 289 353 - -
Gso2g1080 1054 MobiDBLite consensus disorder prediction 373 392 - -
Gso2g1080 1054 Pfam Phosphoenolpyruvate carboxylase 18 328 IPR021135 GO:0006099|GO:0008964|GO:0015977
Gso2g1080 1054 Pfam Phosphoenolpyruvate carboxylase 462 1054 IPR021135 GO:0006099|GO:0008964|GO:0015977
Gso2g1080 1054 Hamap Phosphoenolpyruvate carboxylase [ppc]. 9 1054 IPR022805 GO:0006099|GO:0008964|GO:0015977
Gso2g1080 1054 PRINTS Phosphoenolpyruvate carboxylase signature 149 162 IPR021135 GO:0006099|GO:0008964|GO:0015977
Gso2g1080 1054 PRINTS Phosphoenolpyruvate carboxylase signature 202 218 IPR021135 GO:0006099|GO:0008964|GO:0015977
Gso2g1080 1054 PRINTS Phosphoenolpyruvate carboxylase signature 261 276 IPR021135 GO:0006099|GO:0008964|GO:0015977
Gso2g1080 1054 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 8 1054 IPR021135 GO:0006099|GO:0008964|GO:0015977
Gso2g1080 1054 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 712 724 IPR033129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1080 Gso-Chr2 13264530 13283807 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1080 2 13264530 13283807 Gso2g1080 2 13264530 13283807 ECH
Gso1g0764 1 26771991 26786045 Gso2g1080 2 13264530 13283807 GST