Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1072 ATGAGCAACGCATATGTTAGCTCAACAATATATGCTGTTAGGTGTAAAGAACCATTTTCATTATCTTTCAATGGCTACTCAAACTTCTGTTACGAAAGATTTGACAGAACCCCATCATACTGTTTGTCATGCTGTGGTTGTTGTGATTACTGTTCAGTCTCCACTTACAGAGTACCCATAAAGCCTTGCCTTATAAATGGCTTGAGGCAATCTGCTCTTCTTCAATTGTCAGCTTCTAGAAGGTTGATATTGGGTGGAGGAGACCATTACCTTTCTCGGCTACCAGCTTATGGTGTCCTCAGAGGTTGTCAGGAGCTTAATTCTTCTGTCAATGAGAGAACTGATTATAGTAGTAGTAGTAGATGGAGAATAAAGGGAAGATATATTCGTGCTGCCTCCCAGAAAGGGAGAGAATTTTCCCATTCATTTGGTTCTGATGGTGCTGAAGCAGTTCTCAGCTTGTTGAGTGAGGAGGCAGATAAGGATGCTATTTGTAGCAAATGTAAGAATGCGTCTTCATCAAAAAGAGTGGAAGTTGATAAAAGAAAAAATGTGAGCAGAGAGAAACATTTGAGTTCGAGTGAGAAAGTAGAAACAGAGAAAAAAGGAATTTTGAAACGGCGTGAATCATCCTCCGTAGACTTGAGAAGAGAATATGGAAAAGCCAACCAAGAAAGGGAAGCCTTTGTAAAAAGTGAAAGCCATAGGAAACGAAGAGATGCATCTAGTTGTTCATCTTATTACTCTCTCTCATCAGGAGATTTTGGGAGTGAGCTGGAAGTTCAAGATGAGATTGGTTTGGAAGAGTTGTCACTGGAATATGAGAAGGATGAAGCAAATTGTCTGGAGGAAGTGAAGGAAGAATTCAACAGGCAAGGGGATGACTCAAAGAAGCTGCAGGCTGTTTCAAATAAGGGAAGAATTGCATTTGGTGTGGATATTGATTGGAACCTAAGGAACAAATCTGAAAAGAAGCTGATTGAGGGAACTCTGCAAAACACTGAATCCATAAGAGAACAACAGGATATGCATTCAAGAGAATTTAGAACACATGATTCTGGTCATAAAAAATCATCTATTTCACAAAAGCGAGTCAATAGTGAGGAAGATAAATCTTCTTTTATTGACAATTTGGATAAGAAAGCAAACAAGGCATATATTCAAACAGTAAACAGAAGAAAGCATCAATCTATAGATGTACAAGAGTCTGGTTGTGATGAAGTTGAGACAACTTTGTTATCACAAAAGAAATTCAGTGGCAGGGAAGGGAAGCTTGAGATATCAGAAACAATGTTGAAGGAAACAACTGATGAATATAAAAAGTTTGTTGGTTCAACTTCTACCACAGGAAAGGAAACTTTGACATCGAAGAAGGCATTCAGTGGCAGGGAAGGGAACCTGGCAATATCAGAAACACTTTCACAAGAAACAAATGATAAACATAAAAAAATTGTTGGTTCTACTTCTACCTCTGGAAGGGATGTGATAGATAGAAGTTCCCAGAAATATTCTGGAAATTTAAAAATTGAAGACACTGAAAGGACCTCAAATACTAGGATGAAGGACATGGGAGTGAAAAAAGTTTCAGTTTTGAGTTCTGTTCAGGGAGTGGATAAGCAGAAACACCAAAAAGGAGAGAAGATCATTACACAGATGAAGGATAAAGAGGGGAGAAAAAAATCTGAGCAATTTTCTGAAGTATCAGAAGCTCACAAGTCTAATGTTGAAGATACATCTAGCATAAAGTCTAGAACTAGATTAAAGAACATGGAAGAAAAATCAAACATAAGCTCAGATGCAAGGGTTACGTTGCTCCAAACAGATAAAAGGACAACTCAGAGTTTCCAACACAGGAAAGGATCTGAACTTGTCAGCACTTTATCAGAAGGCTATGTCAGTGATGAAAAGCAAGTTTCAAGTTCTCAAAAAGCTTATGAGAAGGTGAGATTAATTCCAAAAAGTAAATCAACATCACTTGTTAGAACTAGAGAAAGTTCTAGCCAAACTGATGAAAGGATTGCAAAATTTGAATTGGCCAGAGACGACCAAAGATCTTGCAACCTTTCAATTTCTGATGAAACTAACTCAAGAGAGGAATCCAGCTCCCAGGGATCATTGAGTTTGATTTCTGGGGCTGGAAAACATAGTATATTAGCATCAGGTGAAAAAAGAAGGTCTGCAACAATGTTGATCCCTTCCTCTTCTGAAATGGGTGGAGACTCAGTACAATTTGAACTCACTGCAGGAATTGCAAGCCCTGAGATCTTCCTTGGAACTTCAGAAAGTGGTTCTTCTGCTTTGTATGACAATTCAGGAAGAAGTTCTGCTTTGCATCCAGATGCTATCGATTTAGCTAATCGTTTAGAGAAGTCATCTAGACAGTTTGTTGATGAGTTTGCTGAGAGGGTCATGCATGAAGTAACGACTTCAGAAGCACAAGAGATGGAAGTTACAGGAACAAAGTTGACACTTGAAGTTGGTGGTGATCAGATCTACAGCTCAAGGCAACAAGGCACTCAAAATGACGCTCAGTCAAAGAAGCATGATTCTAGTCGTTCTTCTGGGTTTCCTGGGACAAAAGGACCTTCTGATGAGATGTGGGATGTCATGGAACCATCTGTTGAGCAAGGTCAAGTAGCCAAAGAAACGGATATCAGCAAGGAAACAGGGAAAGCAGTTGTTACTAGAACTGGGAGGTCCTTATGGGGTATGATTGGTGATATTGTTCAATTACGTTGGGGTTCACGTGCTGGTTCCTCCACTTCAGCTGGAAGATCAGCTGAGAGAAACTCACCAAACAAGTCTGACAGTGACACATGGTTTTCTGGGCAGGAGCATGAGGAAACCACTAAAACTAATGTCTTAAAAAAAACAAGTGTACCACCACAAGTCATGACTTCTGATAAGTTAAAACCAGGTAAACATTATACCCAAAGTGAGGGAGAGGTGTCTGACAATACAAAACTGAAAGACAGAGGAAAACATCTCGAAGTTGGATTGTCATCCCCAAATACATTGGAAAGTGGATCAATGTCAGTAGGCGCTTCTCATACTTCTGGAGAGGAAAATGTTAGTGGGACTGAGGATAAAAAAGATTTGAAAGCCACTACTTCTGGCACACAAAACATGGAATTACCAATTTCAGTACCTGCCAGAGGGCCTTCTATTGATGGAGAAATTGTAAGCATCGGTGGATCTGACATGTCTGGAGCTGAGTCAGTGGTTCCAATCAAGGAATCTATTGCTCCTGTGCGGTCTGAATTGTCCGGCTCAGAGAGAAAGGATGGAGAGTTGAAGCAAAGAAAGTTTCAACGGAACAGGCAAGTCTTGAGAGATAGGTTTGATGACTGGGAAGAAGCCTATCAATGTGAACTTGAGCAGCGACGCATAGATGAAATGTTCATGAAGGAAGCACTTTTGGAAGCCAAGAAGGCTGCTGATACATGGGAGGTACCTGTTGGTGCTGTTCTTGTGCAGCATGGGAAAATTATTGCTCGAGGCTGCAACTTAGTTGAAGAGTTACGGGACTCCACTGCCCATGCAGAGATGATTTGTATACGAGAAGCTTCAAAGCTTCTTCGATCATGGAGACTATCAGACACTACACTTTATGTAACGCTTGAGCCATGTCCAATGTGTGCTGGTGCTATCCTTCAGGCAAGAGTAGACACTGTTGTGTGGGGTGCTCCCAATAAGCTTCTTGGAGCTGATGGTAGCTGGATTAGAATTTTCCCTGATGGAGGAGAAAATGTATCAGAACAAAGAGATATGCCACCTGCCCCAGTTCATCCATTCCATCCAAACATGAAAATAAGAAGAGGGGTCTTAGCCACTGAGTGTGCAGATGCAATGCAGCAATTCTTTCAGCTTAGAAGGAAAAAGAAGAAAGAGGAACCACCGAATGGCCCTTCTAGCCTTCCTGTTACTCACCACCCATCCAAGTTACTCAACAAGATACATGACGTCTTCCACATCATGTTCTGTTTGTAA 3990 0.4073 MSNAYVSSTIYAVRCKEPFSLSFNGYSNFCYERFDRTPSYCLSCCGCCDYCSVSTYRVPIKPCLINGLRQSALLQLSASRRLILGGGDHYLSRLPAYGVLRGCQELNSSVNERTDYSSSSRWRIKGRYIRAASQKGREFSHSFGSDGAEAVLSLLSEEADKDAICSKCKNASSSKRVEVDKRKNVSREKHLSSSEKVETEKKGILKRRESSSVDLRREYGKANQEREAFVKSESHRKRRDASSCSSYYSLSSGDFGSELEVQDEIGLEELSLEYEKDEANCLEEVKEEFNRQGDDSKKLQAVSNKGRIAFGVDIDWNLRNKSEKKLIEGTLQNTESIREQQDMHSREFRTHDSGHKKSSISQKRVNSEEDKSSFIDNLDKKANKAYIQTVNRRKHQSIDVQESGCDEVETTLLSQKKFSGREGKLEISETMLKETTDEYKKFVGSTSTTGKETLTSKKAFSGREGNLAISETLSQETNDKHKKIVGSTSTSGRDVIDRSSQKYSGNLKIEDTERTSNTRMKDMGVKKVSVLSSVQGVDKQKHQKGEKIITQMKDKEGRKKSEQFSEVSEAHKSNVEDTSSIKSRTRLKNMEEKSNISSDARVTLLQTDKRTTQSFQHRKGSELVSTLSEGYVSDEKQVSSSQKAYEKVRLIPKSKSTSLVRTRESSSQTDERIAKFELARDDQRSCNLSISDETNSREESSSQGSLSLISGAGKHSILASGEKRRSATMLIPSSSEMGGDSVQFELTAGIASPEIFLGTSESGSSALYDNSGRSSALHPDAIDLANRLEKSSRQFVDEFAERVMHEVTTSEAQEMEVTGTKLTLEVGGDQIYSSRQQGTQNDAQSKKHDSSRSSGFPGTKGPSDEMWDVMEPSVEQGQVAKETDISKETGKAVVTRTGRSLWGMIGDIVQLRWGSRAGSSTSAGRSAERNSPNKSDSDTWFSGQEHEETTKTNVLKKTSVPPQVMTSDKLKPGKHYTQSEGEVSDNTKLKDRGKHLEVGLSSPNTLESGSMSVGASHTSGEENVSGTEDKKDLKATTSGTQNMELPISVPARGPSIDGEIVSIGGSDMSGAESVVPIKESIAPVRSELSGSERKDGELKQRKFQRNRQVLRDRFDDWEEAYQCELEQRRIDEMFMKEALLEAKKAADTWEVPVGAVLVQHGKIIARGCNLVEELRDSTAHAEMICIREASKLLRSWRLSDTTLYVTLEPCPMCAGAILQARVDTVVWGAPNKLLGADGSWIRIFPDGGENVSEQRDMPPAPVHPFHPNMKIRRGVLATECADAMQQFFQLRRKKKKEEPPNGPSSLPVTHHPSKLLNKIHDVFHIMFCL* 1330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1072 1329 MobiDBLite consensus disorder prediction 916 939 - -
Gso2g1072 1329 MobiDBLite consensus disorder prediction 539 595 - -
Gso2g1072 1329 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 875 1319 - -
Gso2g1072 1329 MobiDBLite consensus disorder prediction 916 1032 - -
Gso2g1072 1329 MobiDBLite consensus disorder prediction 337 372 - -
Gso2g1072 1329 MobiDBLite consensus disorder prediction 339 372 - -
Gso2g1072 1329 MobiDBLite consensus disorder prediction 176 203 - -
Gso2g1072 1329 Hamap tRNA-specific adenosine deaminase [tadA]. 1135 1292 IPR028883 GO:0002100|GO:0008251
Gso2g1072 1329 SUPERFAMILY Cytidine deaminase-like 1127 1296 IPR016193 GO:0003824
Gso2g1072 1329 CDD nucleoside_deaminase 1135 1242 - -
Gso2g1072 1329 MobiDBLite consensus disorder prediction 1001 1022 - -
Gso2g1072 1329 MobiDBLite consensus disorder prediction 1292 1311 - -
Gso2g1072 1329 MobiDBLite consensus disorder prediction 687 708 - -
Gso2g1072 1329 Gene3D Cytidine Deaminase, domain 2 1119 1301 - -
Gso2g1072 1329 MobiDBLite consensus disorder prediction 534 602 - -
Gso2g1072 1329 Coils Coil 267 292 - -
Gso2g1072 1329 PANTHER TRNA(ADENINE(34)) DEAMINASE, CHLOROPLASTIC 875 1319 - -
Gso2g1072 1329 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 1129 1251 IPR002125 -
Gso2g1072 1329 MobiDBLite consensus disorder prediction 834 867 - -
Gso2g1072 1329 Pfam MafB19-like deaminase 1132 1231 IPR028883 GO:0002100|GO:0008251
Gso2g1072 1329 MobiDBLite consensus disorder prediction 834 858 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1072 Gso-Chr2 13110196 13115404 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1072 2 13110196 13115404 Gso2g1072 2 13110196 13115404 ECH
Gso1g0772 1 27256713 27267874 Gso2g1072 2 13110196 13115404 GST