Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1069 ATGGTGGACTTGGGGAGGAGAAGAATGAGGGGTGAGAGGAGAAGGAAGTTGCATCTTAGCAAGATCTATTCATTTGCATGTGGGAAACAATCACTCAAGGAGGATCATTCACATATTGGAGGGAGAGGGTATTCTAGGGTGGTGTTTTGCAATGAGCCAGAGAGCTTTGAGGCCGGGATAAGGAGTTATGCTGATAATTATGTGAGCTCCACAAAGTATACTCTTGCTTCTTTCTTGCCTAAGTCACTTTTTGAGCAGTTTAGGAGGGTGGCTAATTTCTATTTTTTGGTAACTGGCATCTTGGCCTTCACAAAACTTGCTCCTTATACAGCTGTCAGTGCTATCCTTCCTCTGATTATTATTGTTGGGGCAACTATGATCAAAGAGGGGATTGAAGATTTCCAAAGGAAAAAGCAGGATATTGAGGTGAATAGTAGAAGAGTTAAAGTGCATAAAGGGCATGGAACTTTTGAATATATTGAGTGGAAGAATCTGAAGGTGGGGCATATAGTGAAGATAATGAAGGATGAATTCTTCCCTGCAGACCTCCTACTGCTTTCATCCAGTTATGAGGATGCATTCTGCTATGTTGAGACCATGAACTTGGATGGGGAGACAAATTTGAAGTTAAAACAAGGGTTGGAAGTAATTTCTTCCTTACATGAGGACTTTCATTTCGGTGATTTTAAGGCTACAGTCAAATGTGAAGACCCAAATGCAAATTTATATTCATTTGTTGGGAGCATGGAGTATGAAGAACAACAATATCCCCTTTCTCCTCTGCAACTTCTTCTCAGAGACTCTAAACTTCGTAACACAGACTACGTATTCGGTGCTGTCATCTTCACTGGTCATGACACGAAGGTCATTCAAAATTCCACTGATGCCCCTTCAAAGAGAAGCAAGGTTGAGAAGAAGATGGATAGGGTTATCTACTTCTTGTTTTGTATTTTGTTTCTAATGGCATTTGTTGGATCTATTTTCTTTGGCATTGCAACTGAAGATGACTTGGACAATGGATTGATGAAAAGGTGGTACCTTAGACCAGATGATTCTACAATTTTCTTTGATCCTAAAAGAGCACCTGCTGCTGCTATATTTCATTTTTTGACAGCCTTAATGTTATATGGTTTCTTCATTCCCATCTCATTGTATGTTTCAATAGAAATTGTCAAAGTCCTTCAGAGCATCTTCATCAATCAAGATATCCACATGTACTATGAAGATGCTGACAAACCAGCCCATGCCCGTACTTCAAACTTGAATGAGGAACTTGGCCAAGTTGACACAATACTTTCTGATAAGACTGGAACTCTGACCTGCAACTCGATGGAGTTCATCAAATGTTCCATTGCTGGGGTAGCTTATGGCCGTGGTGTTACAGAGGTTGAGAGGGCAATGAATAGAAAAAATGGTTATCCTTTGATTGATGACACAAGGAGCTCTCCTGTCAGAAATGCTCCCATAAAAGGATTTAACTTTTCAGATGAAAGGATAATGAATGGAAATTGGGTTAATGAGCCTTATGCTAATGTTATCCAGAATTTTTTTCGCTTATTAGCAATCTGCCATACAGCCATTCCAGAAGTTGATGAAGACACAGGGAATATCTCATATGAAACTGAATCTCCAGATGAAGCAGCATTTGTGATAGCAGCTAGAGAAATTGGTTTTGAATTCTTTAAAAGGACTCAGACTAGTTTATCAATGTATGAATTGGATCCAGTTTCTGGTGACAAAACTGAAAGGATGTACAAACTTCTTAATATTTTAGAATTCAATAGCTCAAGGAAGCGAATGTCAGTGATAGTGAAAGATGAAGAAGGGAGAATTTTCCTACTCTGTAAAGGTGCTGACAGTGTCATGTTTGAGAGGCTTGCCAAGGATGGGAGAGAGTTTGAAGAGAAAACCATGGAACATGTGCATGAATATGCTGATGCAGGTCTAAGGACCTTGATCCTAGCATTTCGTGAACTTGATGAAAACCAATACAAGGAGTTTGACAACAAAATTTCACAGGCGAAGAATTCGATTAGCGAAGATCGGGAAACACTGATTGAGGAAGTATCAGATAAGATTGAGAGGAATCTAATCCTTCTTGGTGCCACTGCTGTAGAGGACAAGCTCCAAGATGGGGTTCCTGATTGCATTGACAAGCTTGCCCAAGCTGGAATTAAGATATGGGTATTGACTGGGGATAAAATGGAGACTGCTATCAATATTGGGTTTTCTTGTAGTTTACTTAGACAAGGAATGAAGCAGATTATCATTCATTTGGAAACTCCAGATATTAAAACATTGGAGAAGGCTGGAGACAAGGGTGCTATTGTCAAGGCTTCAAGAGAAAGTATCCGCCATCAAATATCTGAAGCTGCTCAACAGCTTACTGCCTCCAGAGGAACCTCTCAGCAAGCATTTGCTCTAATTATTGATGGAAAATCACTTACTTATGCGCTAGAGGATACTATGAAGAACATGTTTCTAGACCTTGCAATTCGTTGTGCATCTGTTATTTGCTGCCGTTCCTCACCGAAGCAGAAGGCACTGGTCACTAGACTAGTCAAATCTGGTACTGGTAAAACTACATTAGCTATTGGTGATGGAGCTAATGATGTGGGAATGCTTCAAGAAGCAGATATAGGGATTGGAATCAGTGGCGTTGAAGGAATGCAGGCGGTTATGTCTAGTGATATTGCTATTGCACAGTTTCGTTATTTAGAAAGATTACTTCTTGTACATGGACATTGGTGTTACCGAAGGATCTCATCAATGATATGCTATTTCTTCTACAAAAACATCACATTTGGCTTTACTCTATTCTTATATGAGGTGTACGCATCATTCTCTGGGCAACCTGCATACAATGACTGGTTTTTGTCACTCTATAATGTCTTCTTTTCGTCACTTCCCGTGATTGCTCTTGGGGTCTTTGACCAGGATGTGTCTTCTAGGTACTGTCAAAGGTTTCCTATGTTATATCAAGAAGGTGTGCAAAATGTCCTCTTTAGCTGGCGTCGAATTTTCAGCTGGATGCTTAATGGCTTTATTAGTGCCATAATAATTTTCTTCTTCTGCACAAAGGCAATGGAGATTCAAGCCTTTGATGAGAAGGGAAGAACCGCTGGGAGGGACATACTCGGAGCAACGATGTATACTTGTGTGGTTTGGGTTGTGAACTTGCAAATGGCTGTTTCTATAAGTTACTTCACCTTGATTCAACATATTTTCATCTGGGGCTCCATTGCTCTATGGTACCTTTTCCTCCTGGCATATGGAGCATTATCTCCCAGCTTTTCTGGAAATGCTTACAAAGTCTTCATTGAAACTCTTGCACCATCTCCTTCCTTTTGGATTGTGACATTGTTTGTTTCCATCTCAACACTTATCCCATACTTCTCTTACTCAGCAATACAGATGAGGTTCTTTCCCATGTATCATGATATGGTACAATGGATAAGGTACGAGGGAAAGACAAATGACCCTGAATTCGTCGCTATGGTGCGGCAAGGATCATTGCGGCCAACAACCGTCGGTTCAACAGCTCGCTTAGCGGCTAAGGATAATGATTTTAGAGTCAGTGACACTAACCATAGATAG 3597 0.4042 MVDLGRRRMRGERRRKLHLSKIYSFACGKQSLKEDHSHIGGRGYSRVVFCNEPESFEAGIRSYADNYVSSTKYTLASFLPKSLFEQFRRVANFYFLVTGILAFTKLAPYTAVSAILPLIIIVGATMIKEGIEDFQRKKQDIEVNSRRVKVHKGHGTFEYIEWKNLKVGHIVKIMKDEFFPADLLLLSSSYEDAFCYVETMNLDGETNLKLKQGLEVISSLHEDFHFGDFKATVKCEDPNANLYSFVGSMEYEEQQYPLSPLQLLLRDSKLRNTDYVFGAVIFTGHDTKVIQNSTDAPSKRSKVEKKMDRVIYFLFCILFLMAFVGSIFFGIATEDDLDNGLMKRWYLRPDDSTIFFDPKRAPAAAIFHFLTALMLYGFFIPISLYVSIEIVKVLQSIFINQDIHMYYEDADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVERAMNRKNGYPLIDDTRSSPVRNAPIKGFNFSDERIMNGNWVNEPYANVIQNFFRLLAICHTAIPEVDEDTGNISYETESPDEAAFVIAAREIGFEFFKRTQTSLSMYELDPVSGDKTERMYKLLNILEFNSSRKRMSVIVKDEEGRIFLLCKGADSVMFERLAKDGREFEEKTMEHVHEYADAGLRTLILAFRELDENQYKEFDNKISQAKNSISEDRETLIEEVSDKIERNLILLGATAVEDKLQDGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFSCSLLRQGMKQIIIHLETPDIKTLEKAGDKGAIVKASRESIRHQISEAAQQLTASRGTSQQAFALIIDGKSLTYALEDTMKNMFLDLAIRCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFLYEVYASFSGQPAYNDWFLSLYNVFFSSLPVIALGVFDQDVSSRYCQRFPMLYQEGVQNVLFSWRRIFSWMLNGFISAIIIFFFCTKAMEIQAFDEKGRTAGRDILGATMYTCVVWVVNLQMAVSISYFTLIQHIFIWGSIALWYLFLLAYGALSPSFSGNAYKVFIETLAPSPSFWIVTLFVSISTLIPYFSYSAIQMRFFPMYHDMVQWIRYEGKTNDPEFVAMVRQGSLRPTTVGSTARLAAKDNDFRVSDTNHR* 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1069 1198 CDD P-type_ATPase_APLT_Dnf-like 65 1014 - -
Gso2g1069 1198 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9 1190 - -
Gso2g1069 1198 Gene3D - 124 294 - -
Gso2g1069 1198 Gene3D - 700 905 IPR023214 -
Gso2g1069 1198 SUPERFAMILY Calcium ATPase, transduction domain A 150 291 IPR008250 -
Gso2g1069 1198 Coils Coil 657 677 - -
Gso2g1069 1198 Pfam Phospholipid-translocating P-type ATPase C-terminal 893 1143 IPR032630 -
Gso2g1069 1198 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 63 1150 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Gso2g1069 1198 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 836 947 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gso2g1069 1198 ProSitePatterns E1-E2 ATPases phosphorylation site. 434 440 IPR018303 -
Gso2g1069 1198 SUPERFAMILY HAD-like 420 909 IPR036412 -
Gso2g1069 1198 Pfam Cation transport ATPase (P-type) 536 626 - -
Gso2g1069 1198 Pfam Phospholipid-translocating ATPase N-terminal 48 114 IPR032631 -
Gso2g1069 1198 SFLD p-type atpase 414 916 IPR044492 -
Gso2g1069 1198 SFLD Haloacid Dehalogenase 414 916 - -
Gso2g1069 1198 PRINTS P-type cation-transporting ATPase superfamily signature 432 446 - -
Gso2g1069 1198 PRINTS P-type cation-transporting ATPase superfamily signature 865 884 - -
Gso2g1069 1198 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 9 1190 - -
Gso2g1069 1198 SUPERFAMILY Calcium ATPase, transmembrane domain M 60 1143 IPR023298 -
Gso2g1069 1198 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 439 702 IPR023299 GO:0000166
Gso2g1069 1198 Gene3D - 540 699 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1069 Gso-Chr2 13062938 13071890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1069 17 1194 Primary Pumps ATPases AT1G68710 72.488 0.0 1877
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1069 2 13062938 13071890 Gso2g1069 2 13062938 13071890 ECH
Gso1g0776 1 27350672 27359554 Gso2g1069 2 13062938 13071890 GST