Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0984 ATGATAAAGCATCATCACCACCACCGCCACCATCATCATCATCATCATCATCATCATCATCATCATCATCATGTTCTTCATCACCATCATGAGCAACAGCAACAGCAGCATGAGGTGGATGATGAAGAGGTTGAGTTGAACCTTGGTCTTTCTCTCGGTGGAAGATTTGGGGTGGACAAGAACGCCAAAAAAAAGAAGCTTTTGCGTTCTTCTTCTGTGGTGGGGACAATGCCTCTTTTCCGGGAGGACGATGCGGTGGCGCCGTCGGCGGCGGCGTTCCCGGCGCTCATGAGGACTTCGTCTCTGCCGACGGAGACTGAGGAGGAGTGGCGGAGGCGGAAAGAGATGCAGACGCTGCGTCGGATGGAAGCGAAAAGACGCCGGTCGGAGAAGCAGAGGGGATCCCGGGAGGTCGCCGGCGCCGGCGAGGAGGTGGAGGCAGGGAGGAGTGTGGCAATGGGATTCAATAAGTTCGGTTCTTCGGCGGAGGCGGCGGTGCCGCCGCCGCCGGGGTGGGGTGTGCCAGGAAAGCAAGTTGTTCTTGGTGATGTGATGGGGAAGGGAAAGGGGTTTCAAGGATTGTTTGGGCAACCATCTTCTCACGGCTCAGCTGATTCTCAAGGAGGAAGCTCTTCATCACTTTCTGAAATGGATAGCAAGGCTTTTCTTGGATCAAGTAGCTGTGGTGAAGCAAAAAGCCCTATTAGTAATATATCAGCGCAAGAACAAAGCAGCCAGGATCCTGCGGGTTCAGGGGGAAGGACGAATGAGAATGTGACAAGAACTTCCAAAGCTGATCAGGGGGAGAATCCATCTAGGAAACACCATCCTTCCCCGAAAACAATGGGAAGACACATTGGGACAAACTCAATGGAAGACATGCCTTGTGTATTTACAAAAGGGGATGGTCCTAATGGAAGAAGAATTGAGGGTATTTTGTACAAATATGGTAAGGGGGAGGAAGTGAGGATCATGTGTGTGTGCCATGGAAACTTCCTCTCTCCGGCGGAGTTTGTTAAGCATGCTGGTGGCGGCGATGTTGCACACCCCCTTAGGCACATTGTTGTGAACCCTTCTGCTGCTCCCTTTTAG 1092 0.5229 MIKHHHHHRHHHHHHHHHHHHHHHVLHHHHEQQQQQHEVDDEEVELNLGLSLGGRFGVDKNAKKKKLLRSSSVVGTMPLFREDDAVAPSAAAFPALMRTSSLPTETEEEWRRRKEMQTLRRMEAKRRRSEKQRGSREVAGAGEEVEAGRSVAMGFNKFGSSAEAAVPPPPGWGVPGKQVVLGDVMGKGKGFQGLFGQPSSHGSADSQGGSSSSLSEMDSKAFLGSSSCGEAKSPISNISAQEQSSQDPAGSGGRTNENVTRTSKADQGENPSRKHHPSPKTMGRHIGTNSMEDMPCVFTKGDGPNGRRIEGILYKYGKGEEVRIMCVCHGNFLSPAEFVKHAGGGDVAHPLRHIVVNPSAAPF* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0984 363 Pfam Tify domain binding domain 322 356 IPR032308 -
Gso2g0984 363 MobiDBLite consensus disorder prediction 1 30 - -
Gso2g0984 363 PANTHER AFP HOMOLOG 2 28 361 IPR031307 GO:0007165
Gso2g0984 363 Pfam Ethylene-responsive binding factor-associated repression 40 75 IPR012463 -
Gso2g0984 363 MobiDBLite consensus disorder prediction 1 43 - -
Gso2g0984 363 PANTHER NINJA-FAMILY PROTEIN AFP1 28 361 - -
Gso2g0984 363 MobiDBLite consensus disorder prediction 119 145 - -
Gso2g0984 363 MobiDBLite consensus disorder prediction 191 291 - -
Gso2g0984 363 MobiDBLite consensus disorder prediction 229 266 - -
Gso2g0984 363 Pfam Putative nuclear localisation signal 96 219 IPR032310 -
Gso2g0984 363 Coils Coil 112 132 - -
Gso2g0984 363 MobiDBLite consensus disorder prediction 119 143 - -
Gso2g0984 363 MobiDBLite consensus disorder prediction 196 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0984 Gso-Chr2 11474322 11479568 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0984 2 11474322 11479568 Gso2g0984 2 11474322 11479568 ECH
Gso1g0512 1 8217256 8222334 Gso2g0984 2 11474322 11479568 GST