Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0969 ATGGTAAAGATTTGCTGCATTGGAGCTGGCTATGTTGGTGGCCCAACCATGGCTGTGATTGCCTTGAAGTGTCCTGAGATCGAGGTGGTCGTGGTGGACATTGCTGCTCCACGAATCAACGCGTGGAACAGTGACCACCTCCCGATATACGAGCCCGGCCTTGATGATGTGGTGAAGCAGTGTAGGGGGAAGAATCTCTTCTTCAGCACTGATGTGGAGAAGCATGTTGCTGAGGCTGACATTGTCTTTGTCTCGGTGAACACACCGACAAAGACTCAGGGTCTTGGAGCCGGTAAGGCGGCTGATCTCACATATTGGGAGAGTGCTGCCAGGATGATTGCTGATGTATCAAAATCGGACAAGATCGTGGTTGAGAAATCGACCGTGCCTGTGAAAACAGCTGAGGCAATTGAGAGGATTCTGACTCACAATAGGAAAGGCATCAATTTCACAATTCTGTCAAACCCTGAGTTTCTTGCTGAGGGTACAGCAATTGCAGACCTGTTTAAGCCGGATCGAGTCCTCATCGGAGGCAGGGAAACCCCAGAGGGTCAAAAGGCTATTCATTCTCTGAAGAGTGTTTATGCCCATTGGGTTCCTGAGGACAGAATCCTTTGCACCAATTTGTGGTCTGCTGAACTCTCAAAGCTTGCAGCCAATGCTTTCCTGGCCCAGAGGATCTCCTCTGTGAATGCCATGTCGGCGCTTTGCGAGGCAACTGGTGCTGATGTCTCCCAGGTGTCACACTCAATCGGGACAGACTCGAGAATTGGACCAAAGTTCCTGAATGCCAGTGTTGGTTTTGGTGGATCATGCTTCCAGAAGGACATATTGAACTTGGTCTATATCTGTGAGTGCAATGGCCTACCAGAGGTGGCCAATTACTGGAAACAGGTCATCAAGGTGAATGACTACCAGAAAATGCGGTTCGTAAATCGCGTGGTGTCATCAATGTTCAACACAGTCTCAGGGAAGAAGATTGCTGTTTTGGGATTTGCTTTCAAGAAGGACACTGGTGACACTAGGGAGACCCCAGCCATTGATGTGTGCAAGGGCCTTTTGGGAGACAAGGCCAAGTTGAGCATATATGATCCTCAGGTCACTGAGGATCAAATCATGAGGGATTTAGCAATGAAGAAGTTTGATTGGGACCACCCTGCTCATCTTCAACCACTGAGTCCAACTTCCAACAAACAAGTATCTGTGGTTTGGGATGCCTATGAGGCAATCAAGGATGCACATGGCATCTGCGTTATGACTGAGTGGGATGAGTTCAAGAACCTTGATTACCAGAAGGTTTATGACAGCATGCAGAAGCCTGCATTCATTTTCGATGGCCGCAACGTCGTGGATGTTAACAAGCTGAGGGAAATTGGTTTCATTGTTTACTCCATTGGCAAACCTCTAGATTCATGGCTCAAGGACATGCCTGCAGTGGCTTAA 1443 0.4844 MVKICCIGAGYVGGPTMAVIALKCPEIEVVVVDIAAPRINAWNSDHLPIYEPGLDDVVKQCRGKNLFFSTDVEKHVAEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIERILTHNRKGINFTILSNPEFLAEGTAIADLFKPDRVLIGGRETPEGQKAIHSLKSVYAHWVPEDRILCTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGADVSQVSHSIGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIKVNDYQKMRFVNRVVSSMFNTVSGKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVTEDQIMRDLAMKKFDWDHPAHLQPLSPTSNKQVSVVWDAYEAIKDAHGICVMTEWDEFKNLDYQKVYDSMQKPAFIFDGRNVVDVNKLREIGFIVYSIGKPLDSWLKDMPAVA* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0969 480 Pfam UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3 185 IPR001732 GO:0016616|GO:0051287
Gso2g0969 480 SUPERFAMILY UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 315 463 IPR036220 -
Gso2g0969 480 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 210 309 IPR008927 -
Gso2g0969 480 Pfam UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 328 451 IPR014027 GO:0016616|GO:0051287
Gso2g0969 480 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 201 IPR036291 -
Gso2g0969 480 SMART UDPG_MGDP_dh_C_a_2_a 328 452 IPR014027 GO:0016616|GO:0051287
Gso2g0969 480 Gene3D - 241 478 - -
Gso2g0969 480 TIGRFAM NDP-sugDHase: nucleotide sugar dehydrogenase 3 448 IPR017476 GO:0016616
Gso2g0969 480 PIRSF UDPglc_GDPman_dh 2 467 IPR017476 GO:0016616
Gso2g0969 480 Gene3D - 209 240 - -
Gso2g0969 480 Pfam UDP-glucose/GDP-mannose dehydrogenase family, central domain 210 304 IPR014026 GO:0016616|GO:0051287
Gso2g0969 480 Gene3D - 1 208 - -
Gso2g0969 480 PANTHER UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE 1 480 IPR028356 GO:0003979
Gso2g0969 480 PANTHER UDP-GLUCOSE 6-DEHYDROGENASE 1 1 480 - -
Gso2g0969 480 PIRSF UDPglc_DH_euk 1 480 IPR028356 GO:0003979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0969 Gso-Chr2 11262859 11265614 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0969 2 11262859 11265614 Gso2g0969 2 11262859 11265614 ECH
Gso2g0969 2 11262859 11265614 Gso19g0249 19 3569513 3572509 ECH
Gso1g0490 1 7566990 7569707 Gso2g0969 2 11262859 11265614 GST
Gso1g1418 1 50807601 50809869 Gso2g0969 2 11262859 11265614 PCT
Gso2g0969 2 11262859 11265614 Gso1g1418 1 50807601 50809869 PCT