Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0967 ATGGAAGACAAAGACAGAGCAGCCTCCGATCCAGCTGAGTTCGCCGGCGACACGAGTTGGACACTCGCCACCGATGACTCCGACGGTGCGTACCTGTTCCCCGGCGACCGGGAGCGGAGCATACTCAGGGAATTCGGGTGGAACCTCGAACCGGACCAGCCAAACCGGATCGGCACCGACGACGGATCGTGGAGGCCGGTTCAGTCCTCTCTGACCGGTTCGATCGAACCGGCCGCCGCCATGTCGTCTAGGTCGAATAACCAATCGGTGTCGTCCAGCTCCAGCGAGGACCCGCCGGAGAAATCCACCGTCTCCGACGAGAAACCGCCTGAGATACCGAGTAAAGGTAAAAAGAAGGGGCAAAAGCGAATACGGCAGCCACGGTTTGCATTTATGACCAAGACTGAAGTTGATCATCTTGAGGATGGCTACAGATGGCGGAAGTATGGTCAGAAGGCAGTTAAAAATAGTCCTTTCCCTAGGAGCTACTACCGGTGCACAAACAGCAAATGCACGGTGAAGAAGAGGGTTGAACGGTCTTCCGAGGACCCAACAATTGTGATTACCACATATGAAGGGCAACACTGTCATCACACAGTTGGATTTCCTCGAGGGGGAATCATTAGTCATGAAGCTGCATTTGCGGGCCAGTTGGCTCCAACAATGTCACAGTTTTATTATCCGATTCAATTACCCAGCAGAGAGAATGATGATAATAATAATAATACTTTGAGCACTATTTCTCAGCCATGCCAAGCACAGGATGAAACTGGAGAAGGATCAAGTGTTATGATGCCAGCTGATGGATCGTCACCGTCACAGCCTCCCACGGATGAAGGGTTGCTTGGAGATATTGTTCCCCCGGGAATGCGCATCAGATGA 882 0.5238 MEDKDRAASDPAEFAGDTSWTLATDDSDGAYLFPGDRERSILREFGWNLEPDQPNRIGTDDGSWRPVQSSLTGSIEPAAAMSSRSNNQSVSSSSSEDPPEKSTVSDEKPPEIPSKGKKKGQKRIRQPRFAFMTKTEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSEDPTIVITTYEGQHCHHTVGFPRGGIISHEAAFAGQLAPTMSQFYYPIQLPSRENDDNNNNTLSTISQPCQAQDETGEGSSVMMPADGSSPSQPPTDEGLLGDIVPPGMRIR* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0967 293 MobiDBLite consensus disorder prediction 62 99 - -
Gso2g0967 293 SMART WRKY_cls 140 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso2g0967 293 ProSiteProfiles WRKY domain profile. 135 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso2g0967 293 MobiDBLite consensus disorder prediction 233 293 - -
Gso2g0967 293 MobiDBLite consensus disorder prediction 45 128 - -
Gso2g0967 293 SUPERFAMILY WRKY DNA-binding domain 132 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso2g0967 293 Gene3D WRKY domain 127 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso2g0967 293 Pfam WRKY DNA -binding domain 141 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso2g0967 293 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 10 214 IPR044810 GO:0003700
Gso2g0967 293 MobiDBLite consensus disorder prediction 100 117 - -
Gso2g0967 293 MobiDBLite consensus disorder prediction 233 277 - -
Gso2g0967 293 MobiDBLite consensus disorder prediction 1 31 - -
Gso2g0967 293 PANTHER WRKY TRANSCRIPTION FACTOR 57-RELATED 10 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0967 Gso-Chr2 11227738 11235005 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso2g0967 WRKY 1.9e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0967 2 11227738 11235005 Gso2g0967 2 11227738 11235005 ECH