Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0954 ATGGTGCAAGTTGTGTCATTGAGCACTCTGGCAACCTGTGGAAATAGCAGGTTATGTGGATCCTCACCATCTTGGATGGCACCCTTTGAGCCATACAAGAGATCCCAAATTACCTCTTCCAATGGCAGACACTTGGTTTGGAACAATTCTGTGCAGAGCTTGTTCTTAACAAGGCACAGTGATTTTAGGGCTGAAGCAGCATGGATGTTTAGAGGGGGAGAACAAGGGTTGGATGCGAGTTCGGAGCACAGCGAGAGCGCTAATGAGGATATCTTGATGTTCTTCTTTCAGCTCGACTTGGCCACAAGAGTGCAGTACGCTTTAAATATGGAGCAGTATGACATTGCAAAGCAGCTGAGGAACAAACTTGCCGAGGTTGAAGAAGAGGTAATCAAGCAACAACAGTCAAAAAGGGGATTGTCTTCAAAAGGTGAAGCACAAGATAAAGCTATAAGTATTATACGTCTTCGTTCAGACCTCCAGAAAGCTATTGAGAATGAGGATTATGCCTTGGCTGCTGAATTACGTGATGAAATTTCCAAACTTGAAGCAGAGTCTCTAGCTGCATCAGCTACAGCTTTGGCACATGAAAATGCTCAATATGCATTCCGCTTGGGGCAGAAAGTGAGACATAAAAAATTTGGCTATAGAGCTGTGATCTGTGGAATGGATCCAGTATGCAGTGAATCAAGTTCATGGATGGAAAATGCACAAGTTAAAAAATTGTCTCGTGGTTCCGCTCAACCATTTTATCAGGTTCTTGTTGATGTACATGCTGAACCAAATCTATTAGTGGCATATGTTCCAGAGGAGAATCTTTTAACACCTGATAAACCAGACACTGGAAGATTCGATCATCCCTACATCTCTTTTCTATTCTATGGAATGGATTCAGCAGGAGATTTCATCCCAATCAAGCAACTAAGGGAGAAGTACAATAAACCAAGGCATGAAATACCCATTGACCCACCAAATGATGAATGA 984 0.4258 MVQVVSLSTLATCGNSRLCGSSPSWMAPFEPYKRSQITSSNGRHLVWNNSVQSLFLTRHSDFRAEAAWMFRGGEQGLDASSEHSESANEDILMFFFQLDLATRVQYALNMEQYDIAKQLRNKLAEVEEEVIKQQQSKRGLSSKGEAQDKAISIIRLRSDLQKAIENEDYALAAELRDEISKLEAESLAASATALAHENAQYAFRLGQKVRHKKFGYRAVICGMDPVCSESSSWMENAQVKKLSRGSAQPFYQVLVDVHAEPNLLVAYVPEENLLTPDKPDTGRFDHPYISFLFYGMDSAGDFIPIKQLREKYNKPRHEIPIDPPNDE* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0954 327 PANTHER SI:DKEY-261L7.2 81 325 - -
Gso2g0954 327 TIGRFAM yccV: hemimethylated DNA binding domain 201 302 IPR011722 GO:0003677
Gso2g0954 327 SMART YccV_like_2_a 200 304 IPR011722 GO:0003677
Gso2g0954 327 Pfam UvrB/uvrC motif 152 184 IPR001943 GO:0005515
Gso2g0954 327 ProSiteProfiles UVR domain profile. 150 185 IPR001943 GO:0005515
Gso2g0954 327 SUPERFAMILY YccV-like 202 298 IPR036623 GO:0003677
Gso2g0954 327 Coils Coil 172 192 - -
Gso2g0954 327 PANTHER SI:DKEY-261L7.2 81 325 - -
Gso2g0954 327 Coils Coil 109 143 - -
Gso2g0954 327 Pfam Hemimethylated DNA-binding protein YccV like 202 299 IPR011722 GO:0003677
Gso2g0954 327 Gene3D - 199 302 IPR036623 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0954 Gso-Chr2 11075185 11078854 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0954 2 11075185 11078854 Gso2g0954 2 11075185 11078854 ECH
Gso1g0477 1 7174632 7178312 Gso2g0954 2 11075185 11078854 GST