Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0850 ATGGCGTCTGAGAGCGCTTCTCGATCGAGTTCCGCGGCCGATTCGTACATTGGGAGCTTGATAAGCTTGACCTCTAAGAGTGAGATCAGATACGAAGGTATTCTCTACAACATCAACACCGAAGAGTCCAGTATTGGCCTCAGAAACGTGCGGTCTTTTGGAACAGAAGGAAGGAAAAAGGATGGCCCACAAATCCCTCCCAGTGACAAGGTTTATGAGTATATACTTTTCCGTGGGACTGACATCAAGGATTTACAGGTTAAATCTTCTCCACCTGTCCAGCCTACTCCACAAGTCAACAATGACCCAGCTATTATTCAGTCTCACTATCCTTTCCCGGTGACCACATCTACAAGTTTGCCTTCTGCTGTAAGTGGGTCTTTGACTGATCCTAGCTCTCATACCACACAACTTGGACTTCCCGGGTCAAATTTTCAAGGGCCCTTACCTTTGTATCAACCTGGAGGGAACATAGGATCGTGGGGAGCTTCTCCACCTGCTCCTAATGCAAATGGTGGTCGGCTTGCTATGCCACCAATGTATTGGCAAGGATATTATGGTGCCCCAAATGGGCTTCCTCAATTACACCAACAATCTTTGCTTCAACCGCCACCTGGTTTATCAATGCCTTCATCTATGCAGCAGCCAATGCAGTATCCCAATTTTACCCCCCCTTTACCTACTGTATCTTCTAATTTGCCTGAATTGCCATCATCTTTGCTGCCTGTGAGTGCTAGTACCCCTAGTGTAACATCTGCTTCCTTGCCTCCTAATTTGCCTCCAGCACCTTCTGCTTTGCCTCCTGCTCCTTCAGCCTTGCCTCCTGCTCCTTCTGCTTTATCTCCCGTTCCTTCTGCAACGCTTGCTTCTGAAATTTTTCCAGTATCAGTAGCAAATAAGGCACCCAATGTTTCAACTTCCGCAGCCATGTTAGCTTCTAACTTACCATCACTGGCTTTGCTGACCAATCCTGCTCGAGATATCAATGCTATAGTGCCACCCATTTCCAGCAAATCGAATGCAATTTCAGGTTCAAGCTTGCCCTACCAATCTGTATCCCAGTTGTCTCCTGCAGTTGTTGAATCATCGACTTCTATCCACACAGAAACATCAGCACCTTCTTTGGTAACCCCAGGACAATTATTGAAGCCTGGACCAATTATAGTTTCTTCGGCTCAGCCTTCACAAGCACCTCATAAGGATGTTGAAGTTGTTCAGGTATCATCAACATCATCTCCTGAGCCATCTGTACCAGTTTCTGTGGAAACTCAACCACCAATACTGCCATTGCCAGTAACTTCACGGCCCAATCACAGGCCTGGTGGAGCTCCTACCCAAACTCATCATCATGGCTATAGTTATAGAGGACGTGGAAGAGGAAGAGGAACTGGGGGTTTCCGCTCAGTCACAAAATTCACTGAAGATTTTGATTTCACAGCAATGAATGAGAAGTTCAAAAAGGATGAAGTATGGGGTCATCTTGGTAAAAGTAAGTCTCATTCAAAAGACAATAACGGGGAAGAAAATGCCTTTGATGAAGATTACCAAGATGAAGACAATGACGATGTATCAAACATTGAGGTTAAGCCTGTTTATAACAAGGACGACTTCTTTGACTCGCTCTCTTCCAACATGCATGGTAATGCTTCACAGAATGGAAGGACTCGATACTCCGAACAAATCAAGATTGATACTGAGACGTTTGGCGATTATGTGAGGTACCATGGTGGTCGTGGGGGCCGTGGCCCTGGCCGTGGTGGACGTACTCGAGGTGGTTATTATGGAAGAGGAGGAGGGTATGGCTACTCTGGACGAGGGAGGGGACGCGGCATGCCAAGTCGCACTTTGTAG 1851 0.4662 MASESASRSSSAADSYIGSLISLTSKSEIRYEGILYNINTEESSIGLRNVRSFGTEGRKKDGPQIPPSDKVYEYILFRGTDIKDLQVKSSPPVQPTPQVNNDPAIIQSHYPFPVTTSTSLPSAVSGSLTDPSSHTTQLGLPGSNFQGPLPLYQPGGNIGSWGASPPAPNANGGRLAMPPMYWQGYYGAPNGLPQLHQQSLLQPPPGLSMPSSMQQPMQYPNFTPPLPTVSSNLPELPSSLLPVSASTPSVTSASLPPNLPPAPSALPPAPSALPPAPSALSPVPSATLASEIFPVSVANKAPNVSTSAAMLASNLPSLALLTNPARDINAIVPPISSKSNAISGSSLPYQSVSQLSPAVVESSTSIHTETSAPSLVTPGQLLKPGPIIVSSAQPSQAPHKDVEVVQVSSTSSPEPSVPVSVETQPPILPLPVTSRPNHRPGGAPTQTHHHGYSYRGRGRGRGTGGFRSVTKFTEDFDFTAMNEKFKKDEVWGHLGKSKSHSKDNNGEENAFDEDYQDEDNDDVSNIEVKPVYNKDDFFDSLSSNMHGNASQNGRTRYSEQIKIDTETFGDYVRYHGGRGGRGPGRGGRTRGGYYGRGGGYGYSGRGRGRGMPSRTL* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0850 616 MobiDBLite consensus disorder prediction 493 528 - -
Gso2g0850 616 CDD LSm14_N 16 87 IPR025609 -
Gso2g0850 616 Pfam Scd6-like Sm domain 16 89 IPR025609 -
Gso2g0850 616 Pfam FDF domain 471 569 IPR019050 -
Gso2g0850 616 MobiDBLite consensus disorder prediction 419 433 - -
Gso2g0850 616 PANTHER PROTEIN DECAPPING 5-LIKE 5 608 - -
Gso2g0850 616 PANTHER SCD6 PROTEIN-RELATED 5 608 - -
Gso2g0850 616 SMART FDF_2 470 572 IPR019050 -
Gso2g0850 616 SMART LSM14_2 10 110 IPR025609 -
Gso2g0850 616 MobiDBLite consensus disorder prediction 493 509 - -
Gso2g0850 616 MobiDBLite consensus disorder prediction 408 466 - -
Gso2g0850 616 ProSiteProfiles DFDF domain profile. 464 500 IPR025762 -
Gso2g0850 616 MobiDBLite consensus disorder prediction 243 281 - -
Gso2g0850 616 ProSiteProfiles FFD box profile. 530 545 IPR025761 -
Gso2g0850 616 SUPERFAMILY Sm-like ribonucleoproteins 15 92 IPR010920 -
Gso2g0850 616 Gene3D - 6 92 - -
Gso2g0850 616 MobiDBLite consensus disorder prediction 254 281 - -
Gso2g0850 616 MobiDBLite consensus disorder prediction 575 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0850 Gso-Chr2 9638607 9645309 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0850 2 9638607 9645309 Gso2g0850 2 9638607 9645309 ECH