Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0840 ATGTCTTCACACCCCTCTCTCTTTTCCCTCTTCTTCTTCCTCCTTCTCTCCCTCCCACAACATTCCTTCTCCTCAACAGAGGAGTATCTCAAATTACCCTTACTCCCTCGCACCCCCCTCCCCTCCCCCTCCCACCTCCTCGCCGCCGACCTCCGCCGCCTCTCCGCCAACTCCCCCCTCACCTCCGGCGCCCCCACCGGCTCCGGCCAGTACTTCGCCTCCCTCCGCCTCGGCTCCCCTCCCCAGCGCCTCCTCCTCGTCGCCGACACCGGCAGCGACCTAATCTGGGTCAAATGCTCCGGCTGCCGCCGCAACTGCTCTTCCACCGCCTTCCTCCCCCGCCACTCCGCCTCCTTCTCCCCCCATCACTGCTACGACTCGCCGTGCCAACTCGTCCCCCACCCCCCGAGTCCCAAAAATCATCTCTGCAACAATCACACCAAACTCCACACCCCATGCCACTACCAATACTCCTACGCCGACGGGTCCACCTCCACGGGCTTCTTCTCCAAAGAAACAATATCACTCAACACAACTAACTCTACTCGTCAAACAAGACTCAATAAACTTTCCTTCGGCTGCGCCTTCCGTACCTCCGGCCCAAGCGTCACGGGCCACAGCTTCAACGGCGCGCAGGGCGTAATGGGCTTGGGCCGCGGCCCGATCTCCTTCACCTCTCAACTCGCCCGCAAACTCAGCAACACAAAGACCAAAAACACCTTCTCTTACTGTCTTCTCGACTACACCCTCTCCCCTCCCCCTACTAGCTACCTCACCATTGGCCCCACCCCTAACGACGTCGTTTCGCGAAACTCATTCACTTACACTCCGTTACTCACTAACCCTTTCTCTCCTTCCTTTTACTACATTTCTATTCAGAGTGTTTCTGTTGACGGCGTTAGGTTACCGATAAGTGAATCTGTTTTCCGGATTGACGCCAACGGTAATGGCGGCACCGTCGTGGATTCCGGCACCACGCTCAGCTTTCTCGCCGAGCCGGCTTACGGGAAGATCCTCGCGGCGTTCCGGCGGCGCGTGAGGCTTCCGGCGGTGGAGAGCGCTGCCGCGCTGGGGTTCGACCTTTGTGTTAATGTTTCCGGCGTGGCGAGGCCGAAGCTGCCGCGGCTGAGATTCCGGCTCGCCGGGAAAGCGGTTCTGTCGCCGCCGGTGGGTAATTATTTTATTGAACCGGCGGAGGGAGTTAAGTGTCTTGCGGTTCAGCCGGTTCGACCGGATTCGGGGTTTTCGGTGATTGGGAATCTGATGCAGCAGGGGTACTTGTTTGAGTTCGATTTGGACCGGTCGCGGATCGGGTTCACGCGTCACGGATGCGCGGTTCGTTGA 1344 0.5923 MSSHPSLFSLFFFLLLSLPQHSFSSTEEYLKLPLLPRTPLPSPSHLLAADLRRLSANSPLTSGAPTGSGQYFASLRLGSPPQRLLLVADTGSDLIWVKCSGCRRNCSSTAFLPRHSASFSPHHCYDSPCQLVPHPPSPKNHLCNNHTKLHTPCHYQYSYADGSTSTGFFSKETISLNTTNSTRQTRLNKLSFGCAFRTSGPSVTGHSFNGAQGVMGLGRGPISFTSQLARKLSNTKTKNTFSYCLLDYTLSPPPTSYLTIGPTPNDVVSRNSFTYTPLLTNPFSPSFYYISIQSVSVDGVRLPISESVFRIDANGNGGTVVDSGTTLSFLAEPAYGKILAAFRRRVRLPAVESAAALGFDLCVNVSGVARPKLPRLRFRLAGKAVLSPPVGNYFIEPAEGVKCLAVQPVRPDSGFSVIGNLMQQGYLFEFDLDRSRIGFTRHGCAVR* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0840 447 SUPERFAMILY Acid proteases 65 444 IPR021109 -
Gso2g0840 447 Pfam Xylanase inhibitor N-terminal 71 261 IPR032861 -
Gso2g0840 447 PRINTS Pepsin (A1) aspartic protease family signature 77 97 IPR001461 GO:0004190|GO:0006508
Gso2g0840 447 PRINTS Pepsin (A1) aspartic protease family signature 319 330 IPR001461 GO:0004190|GO:0006508
Gso2g0840 447 PRINTS Pepsin (A1) aspartic protease family signature 416 431 IPR001461 GO:0004190|GO:0006508
Gso2g0840 447 PANTHER BNAA02G27600D PROTEIN 8 446 - -
Gso2g0840 447 CDD pepsin_A_like_plant 70 444 IPR034161 -
Gso2g0840 447 Gene3D Acid Proteases 52 261 IPR021109 -
Gso2g0840 447 Pfam Xylanase inhibitor C-terminal 288 440 IPR032799 -
Gso2g0840 447 ProSiteProfiles Peptidase family A1 domain profile. 71 440 IPR033121 -
Gso2g0840 447 Gene3D Acid Proteases 262 446 IPR021109 -
Gso2g0840 447 PANTHER OS07G0603500 PROTEIN-RELATED 8 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0840 Gso-Chr2 9490150 9491811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0840 52 444 Miscellaneous Gene Families AT1G77480 27.007 8.37e-24 101
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0840 2 9490150 9491811 Gso2g0840 2 9490150 9491811 ECH
Gso1g0747 1 26273093 26274809 Gso2g0840 2 9490150 9491811 GST