Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0835 ATGGCTGGAACATCATGGTTGGTGGACAAAAGTAGAATTGCAACCAAAATAAAATGTACATCAGGAGCTTGTGATCATGGAAAGGTTATATGGAAAAGCAATCCTACCAAGGCTTGCCCAAATTGTCAACATGCTATTGACAACGGTGATGTAGCACAAGAGTGGCCTGGCTTGCCAAAAGGTGTCAAATTTGATCCATCTGATCAGGAGATCATTTGGCACTTGCTTGCAAAAGTTGGGGTAGGAGATTCAAAATCTCATCCCTTCATTGATGAATTTATTACTACTCTTGAAGTGGATGATGGAATTTGTTATACTCATCCTCAAAATTTACCTGGTGTTAGGCAAGATGGAAGTGCTTCCCACTTCTTCCATAGAGCAATCAAGGCTTACAACACGGGCACCCGAAAGCGCCGAAAAATACTAGGGCAAGATTTTGGTGATGTCCGCTGGCACAAGACTGGAAGGACTAAACCAGTTGTCTTGAGTGGGGTTCAAAAAGGCTGTAAAAAGATTATGGTTCTGTATGTGAGCAATGTAAGAGGAGGAAAAGCTGAGAAAACTAATTGGGTTATGCATCAATATCACCTAGGAACAGAAGAGGATGAAAAGGATGGGGAGTACATTATCTCTAAAGTGTTTTACCAGCAGCAGCAAGTCAAATTGGGTGATAAAAATGACCAAGATGTTCCTGAAGCCTCTGAAATCACTGGACCCCACCCAGGTCTGTCTGTGGGAGAAGAAGGGACTATTGAGAAAGTGGATCCAGTCACTCCGAAATTGGTGACTCCTGAGCCTCCTTGTAATGGAAGGTGGTGTGCAGATCTAGACCTAGGACAAGAAACACATAATGTTCCTCAGCCTCCTCGGATGGATTGTTTAGATGAAATTCAAGCTGATTGCCAAGTACTTGCAAATGAATCATCCATGGTAGAAACTCAACACAATGAAGGGATGGATGATAAAGAAAATAATGCGGAGGATGGCCAAAAATGGTGGGACAGTGAGTCACAGAATCTGTTGGATTCACAACAACTGGTCGAGGCACTGTCGCTGTGTGACGATCTACTCCAAAGCCAGTCTCCCAGTAGAGATGGAAAACATGAAGATCACAAGAACCAACCCGGTCTTTCTGTTTATGCTCAGTTAGGACCAGAACATCTGAAGAAGGATATTGAAGAGTGTCAAAATCTTGCCCTTAATCCTGCAAATATAGAGAACGATACACCTTCAGAGTTTCAACTAAGTCAGCTGGAATTTGGTTCACAGGACAGCTTTATTTCCTGGGGCTACAGCAAGGCAGTGAACTAA 1311 0.4302 MAGTSWLVDKSRIATKIKCTSGACDHGKVIWKSNPTKACPNCQHAIDNGDVAQEWPGLPKGVKFDPSDQEIIWHLLAKVGVGDSKSHPFIDEFITTLEVDDGICYTHPQNLPGVRQDGSASHFFHRAIKAYNTGTRKRRKILGQDFGDVRWHKTGRTKPVVLSGVQKGCKKIMVLYVSNVRGGKAEKTNWVMHQYHLGTEEDEKDGEYIISKVFYQQQQVKLGDKNDQDVPEASEITGPHPGLSVGEEGTIEKVDPVTPKLVTPEPPCNGRWCADLDLGQETHNVPQPPRMDCLDEIQADCQVLANESSMVETQHNEGMDDKENNAEDGQKWWDSESQNLLDSQQLVEALSLCDDLLQSQSPSRDGKHEDHKNQPGLSVYAQLGPEHLKKDIEECQNLALNPANIENDTPSEFQLSQLEFGSQDSFISWGYSKAVN* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0835 436 MobiDBLite consensus disorder prediction 358 377 - -
Gso2g0835 436 ProSiteProfiles NAC domain profile. 58 216 IPR003441 GO:0003677|GO:0006355
Gso2g0835 436 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 2 430 IPR044799 GO:0003700
Gso2g0835 436 MobiDBLite consensus disorder prediction 228 247 - -
Gso2g0835 436 PANTHER SUPPRESSOR OF GAMMA RESPONSE 1 2 430 - -
Gso2g0835 436 SUPERFAMILY NAC domain 43 216 IPR036093 GO:0003677|GO:0006355
Gso2g0835 436 Gene3D NAC domain 67 221 IPR036093 GO:0003677|GO:0006355
Gso2g0835 436 Pfam No apical meristem (NAM) protein 59 197 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0835 Gso-Chr2 9432839 9438673 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0835 30 223 NAC Transcription Factor Family AT1G28470 56.000 3.96e-72 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso2g0835 NAM 6.2e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0835 2 9432839 9438673 Gso2g0835 2 9432839 9438673 ECH
Gso1g0744 1 26017507 26023398 Gso2g0835 2 9432839 9438673 GST