Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0833 ATGGCAACTATAGGAATTGGAGTAGGAGTGACAAAGCTTCAACAACCCCACAGACCAAAGTCTAAGTCCTTGTTTCTTGGACAGAGGCTTAGAATTAGACCCTTTTGGGGGGAGCCTCAATGCAGTGAAAGAAGACTATTCGGTGTCTCAAACCCACCAAGAGTGGTTCAAGTTTTTGCACTAGGGGGTGGTGAATGGCTTGACACAGTTCATAATCTCTTTGTGGGTGTTGGGGTTGGACTTCCTTGCAGTGTGATGCAGTGTGGTGATGTGATCTATCGGAGCACTCTTCCTAAGTCCAATGGCTTGACACTCACTGTCCCTGGGGTGATTCTGGCTTTGGGGACTCTTTCTTATCTTTGGGCCACACCTGGTGTGGCACCTGGTTTCTTTGACATGTTTGTTCTTGCTTTTGTTGAGAGGCTCTTCAGGCCCACTTACAAGAAGGATGATTTTGTTCTGGGGAAGAAGTTGGGGGAGGGGTCATTTGGAGTTGTTTATAGAGTGTCACTGGCCAACAAACCCTCTTCAAAGGAAGGTGACTTAGTCTTGAAGAAAGCAACTGAATATGGTGCTGTAGAAATTTGGATGAACGAGCGTGTACGAAGAGCTTGTGCAAGCAGCTGTGCAGATTTTGTTTATGGTTTTCTTGAGAGCTCTTCAAAGAAAGCCGCTGAATACTGGCTTATATGGCGGTTTGAAGGGGATGCCACCCTAGCTGACTTGATGCAGAGTAGAGACTTTCCATATAATGTTGAAACATTAATTTTGGGTGAGGTCCAAGACTTGCCCAAAGGATTGGAAAGAGAAAATAGAATCATTCAAACAATCATGAGGCAGATCTTGTTTGCACTGGATGGTCTTCACTCAACTGGTATTGTGCATAGGGATATTAAGCCACAAAACGTTATTTTCTCTGAAGAATCTCGTACTTTCAAAATTATTGATCTTGGAGCTGCTACAGACCTGCGAGTTGGCATCAACTACATTCCGAAGGAGTTTCTTTTGGATCCAAGATATGCTGCACCAGAACAGTACATCATGAGCACACAAACTCCATCAGCACCCTCAGTTCCGGTTGCAACTGCACTTTCCCCAGTCTTATGGCAGTTGAATTTACCAGACAGATTCGATATCTATAGTGCTGGTTTAATCTTTCTTCAAATGGCATTCCCCAGTTTACGTTCTGATAATAGCCTCATACAATTCAACCGTCAACTAAAGAGGTGTGACTATGACTTGGTCGCGTGGAGAAAAACCGCTGAGCCTCGATCTGAACTTAGGAAGGGCTTTGAGTTGTTGGATTTGGATGGTGGAATAGGATGGGAACTTCTGAAATCAATGGTAAGGTACAAAGCAAGACAAAGACTGAGTGCAAAAGCAGCATTAGCTCATCCTTACTTTGTCAGAGAAGGCTTGTTGGCATTGTCTTTCATGCAAACACTGAGACTGCAGCTCTTACGTGCAACTCAGCAGGATTATTCAGAAGCTGCTAGGTGGGTTATTCAGCTAATGGCAAAATCAGGGACACAGAAGGATGGTGGATTCACCGAAGCTCAGCTTCAAGAACTGAGAGAAATTGAACCTAAAAAGAAGGCTAGTGCACCAAGAAATGCTCTAGCTTCAGCCCTTAAACTTCAGAGGAAAATTATAAGAACTATAAGAACCTTAAATGAGAGTATGGATGAGCTCACAAGACGCCGGAAAAGCTTTTGGTGGAGCAGATGGATCCCTAGAGAGGAATGA 1746 0.441 MATIGIGVGVTKLQQPHRPKSKSLFLGQRLRIRPFWGEPQCSERRLFGVSNPPRVVQVFALGGGEWLDTVHNLFVGVGVGLPCSVMQCGDVIYRSTLPKSNGLTLTVPGVILALGTLSYLWATPGVAPGFFDMFVLAFVERLFRPTYKKDDFVLGKKLGEGSFGVVYRVSLANKPSSKEGDLVLKKATEYGAVEIWMNERVRRACASSCADFVYGFLESSSKKAAEYWLIWRFEGDATLADLMQSRDFPYNVETLILGEVQDLPKGLERENRIIQTIMRQILFALDGLHSTGIVHRDIKPQNVIFSEESRTFKIIDLGAATDLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSVPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPSLRSDNSLIQFNRQLKRCDYDLVAWRKTAEPRSELRKGFELLDLDGGIGWELLKSMVRYKARQRLSAKAALAHPYFVREGLLALSFMQTLRLQLLRATQQDYSEAARWVIQLMAKSGTQKDGGFTEAQLQELREIEPKKKASAPRNALASALKLQRKIIRTIRTLNESMDELTRRRKSFWWSRWIPREE* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0833 581 PANTHER SERINE/THREONINE-PROTEIN KINASE STN7, CHLOROPLASTIC 12 581 - -
Gso2g0833 581 Gene3D Transferase(Phosphotransferase) domain 1 261 472 - -
Gso2g0833 581 ProSiteProfiles Protein kinase domain profile. 152 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g0833 581 ProSitePatterns Protein kinases ATP-binding region signature. 158 185 IPR017441 GO:0005524
Gso2g0833 581 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 12 581 IPR044803 GO:0004674|GO:0009579
Gso2g0833 581 ProSitePatterns Serine/Threonine protein kinases active-site signature. 293 305 IPR008271 GO:0004672|GO:0006468
Gso2g0833 581 Pfam Protein kinase domain 154 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g0833 581 SUPERFAMILY Protein kinase-like (PK-like) 147 473 IPR011009 -
Gso2g0833 581 SMART serkin_6 152 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g0833 581 Gene3D Phosphorylase Kinase; domain 1 138 232 - -
Gso2g0833 581 CDD STKc_SNT7_plant 156 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0833 Gso-Chr2 9410031 9415762 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0833 270 468 Core Cell Cycle Gene Families AT2G38620 28.910 1.78e-14 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Gso2g0833 Pkinase 6.5e-19 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0833 2 9410031 9415762 Gso2g0833 2 9410031 9415762 ECH
Gso1g0742 1 25968991 25974803 Gso2g0833 2 9410031 9415762 GST