Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0832 ATGCCACCGACACTCTCACTCTCACTAGTGTTGGTGGTGCTGTTTTTCGCCGCCGTGGACGCGCATTTTCCGGCGACCGGCGAGCTTCCAACGTTCCGCGAGGCGCCGGCATTCCGCAACGGAAGAGAATGCCGCAACCGCCCGCGAAGCGACTCCGTGATCCACATCGCGATGACGCTTGACGCGACCTACCTCCGAGGCTCCGTCGCCGGAGTGTTCTCCGTGCTGCAGCACGCGTCGTGTCCGGAGAACGTCGTGTTCCACTTCATCGCCACCACGCACCGCCGCACGGAGCTCCGCCGCATCATCACCGCGACGTTCCCGTACCTCTCCTTCCACCTCTACCACTTCGATGCGAACCTCGTCCGCGGCAAGATCTCGTACTCGATCCGGCGCGCGCTGGATCAACCGCTAAACTACGCGCGCATGTACCTCGCGGATCTTCTTCCGGCGACCGTGCGGCGAATCATTTACTTCGACTCCGACCTCATCGTCGTTGATGACGTGGCGAAGCTCTGGAGCATCGATCTCCACGCGCGCGTGCTTGGCGCGCCGGAGTACTGCCACGCGAACTTCACCAACTACTTCACGCACCGCTTCTGGTCAAACCCTAGCTACGCGGCGTCATTTAAGAGACGCGACGCGTGCTACTTCAACACTGGCGTAATGGTGATCGATCTGTGGAAATGGCGCGAGGGAAGATACACGGAGAAGCTTGAGACGTGGATGCGGATCCAGAAGCGGAACCGGATCTATGAACTAGGTTCGTTGCCACCGTTTCTGCTTGTTTTCGCCGGTGACGTGGAGCGCGTAGAGCACCGGTGGAACCAGCACGGCCTGGGCGGCGATAACCTCGAAGGTCTCTGCCGAGATCTGCATCCCGGTCCGGTGAGTTTACTTCACTGGAGCGGCAAGGGGAAGCCGTGGCTGCGAATCGATTCCAAGAAGCCGTGTCCGTTGGATAGTCTTTGGGCTCCGTACGATCTCTTTCGCCACTCGCCGTCACTGTTCTCCGATTCGTAG 1023 0.6031 MPPTLSLSLVLVVLFFAAVDAHFPATGELPTFREAPAFRNGRECRNRPRSDSVIHIAMTLDATYLRGSVAGVFSVLQHASCPENVVFHFIATTHRRTELRRIITATFPYLSFHLYHFDANLVRGKISYSIRRALDQPLNYARMYLADLLPATVRRIIYFDSDLIVVDDVAKLWSIDLHARVLGAPEYCHANFTNYFTHRFWSNPSYAASFKRRDACYFNTGVMVIDLWKWREGRYTEKLETWMRIQKRNRIYELGSLPPFLLVFAGDVERVEHRWNQHGLGGDNLEGLCRDLHPGPVSLLHWSGKGKPWLRIDSKKPCPLDSLWAPYDLFRHSPSLFSDS* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0832 340 Pfam Glycosyl transferase family 8 55 312 IPR002495 GO:0016757
Gso2g0832 340 PANTHER GALACTURONOSYLTRANSFERASE-LIKE 3-RELATED 11 339 - -
Gso2g0832 340 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 11 339 - -
Gso2g0832 340 SUPERFAMILY Nucleotide-diphospho-sugar transferases 54 332 IPR029044 -
Gso2g0832 340 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 55 321 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0832 Gso-Chr2 9392563 9394204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0832 28 340 Glycosyltransferase AT1G13250 79.375 0.0 503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0832 2 9392563 9394204 Gso2g0832 2 9392563 9394204 ECH
Gso1g0739 1 25931705 25933591 Gso2g0832 2 9392563 9394204 GST