Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0828 ATGGCTTCCATGAGCTCTCTGAAGATGATTTCTTCCCTCAAGCTCTCCCATTTAAGTTGTTCTATCTCTCCTCTTTCAACCCAAAAGCAAGTAGGTTCAAGTCTCTTTCAATCCTTCCCAACCAAAACCTTAAAATTCTCAGCTACTCCTCAAGTATCTACATCTAGAAGAAGTACCAACAAGACTACAACCACTGCATTCTTCTTCAATAACCAAAAGCAGCATCAAGATTCATCACAGCCAACCAAAGTTCAAGAGCTCTTTGTCTACGAAATCAACGAACGCGACCGAGGAAGTCCTGCATACCTCAAGCTAAGCCAGAAGCAAGTTAACTCTCTTGGAGACTTAGTGCCATTCAGCAACAAGATATACTCAGGAGACTTGCAAAAGAGGCTAGGGATAACTGCAGGCTTGTGTGTGCTCATCCAGCATGAGCCTGAGAAAAAGGGTGACAGATATGAGGCCATTTACAGCTTCTACTTTGGTGACTATGGCCACATATCAGTGCAAGGAGCCTATCTAACATACCAAGACACATATTTGGCTGTTTCTGGAGGCTCTGGAATCTTTGAAGGTGTGTATGGACAAGTGAAGCTTCACCAACTTGTGTTCCCTTTCAAGCTTTTCTACACCTTCTACTTGAAGGGTGTGCCTGATTTGCCTCCTGAGCTGCTTGGGAAGCCTGTTGAACCTTCTCCAAGTGTTGAGCCTTCTCCTGCTGCTATGGCTACTGAGCCTCATGCTTGTTTACCAAACTTCACCAACTGA 768 0.4453 MASMSSLKMISSLKLSHLSCSISPLSTQKQVGSSLFQSFPTKTLKFSATPQVSTSRRSTNKTTTTAFFFNNQKQHQDSSQPTKVQELFVYEINERDRGSPAYLKLSQKQVNSLGDLVPFSNKIYSGDLQKRLGITAGLCVLIQHEPEKKGDRYEAIYSFYFGDYGHISVQGAYLTYQDTYLAVSGGSGIFEGVYGQVKLHQLVFPFKLFYTFYLKGVPDLPPELLGKPVEPSPSVEPSPAAMATEPHACLPNFTN* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0828 255 Pfam Allene oxide cyclase 80 253 IPR009410 GO:0016853
Gso2g0828 255 PANTHER ALLENE OXIDE CYCLASE 4, CHLOROPLASTIC 2 255 IPR009410 GO:0016853
Gso2g0828 255 PANTHER ALLENE OXIDE CYCLASE 4, CHLOROPLASTIC 2 255 - -
Gso2g0828 255 SUPERFAMILY Allene oxide cyclase-like 83 255 IPR034871 GO:0009695|GO:0046423
Gso2g0828 255 Gene3D - 69 255 IPR044859 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0828 Gso-Chr2 9256062 9257547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0828 47 255 Acyl Lipid Metabolism Gene Families AT1G13280 66.667 2.64e-94 276
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0828 2 9256062 9257547 Gso2g0828 2 9256062 9257547 ECH