Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0824 ATGCAATTTGCTGAGAAAATGCAACCCTTGAAAATGGGGTTCCGTGAGTACATCGAAGCTTTGGAGGAAGAAAGGAAAAAAATCCAAGTTTTCCCTAAAGAGCTTCCTTTGTCATTAGAGCTTGTCACACAAGCAATTGAGGCGTGTAGACAGCAATTGTGTGGAACGGTTGCGGAGTACAATTTGAATGCCCAATCGGAGTGTTCGGAGCAGACATCAACGGATGGACCTGTTTTTGAGGAGTTCATTATTCCTATAAAGAAAAAGGCATCTCAAGCATCTGTTGAAGAAGATGATGATGAAGAACATTCTCATAAACACACAAAAACCACCACTGATAAAAAGAAATCAGATTGGCTCAGATCCGTTCAGTTGTGGAATCCCAATCCACCTCCTACCAAAGAGGATGTTGTGCCTAGGAAAACTAATGTTGTGGAAGTGAAGAGAAACGGTGGTGGAGCTTTTCAACCATTCCAAAGAGAGGAAAAAAGTGGTGTTTCAAAGGCTAATAATAATAATGAAGCATCGGCAATTGGTAAAGCGCCCTCTTCACCACCAGTGCCTGCTACAAGTTATACAGAGCCAGTGAGAGTAGACAGCAAAAAAGAGGAGAAAGGAGACGCTCAGAGAAAGCAACGCAGGTGCTGGTCACAAGAATTGCACAAGAGATTCTTGCATGCACTTCAACAACTTGGGGGTGCAGATTCTGCCACGCCCAAACAAATCAGGGAATTAATGAAGGTTGATGGCCTCACCAATGATGAAGTCAAAAGTCATTTACAGAAATTTCGTCTTCACACTAGAAGAAGCCCCATAATCCACAACAGTGCAAGTTCACAAGCAGGCTCTTTATTTCTTGTGGGGAACATTTTTGTGCAGCCACCAGAATATGCTACCTCATCAGCATCTGGAGGGGAATTGACCACAGCTACCCCTGCTGCTCCAACTGGAATATATGCACCTGTGGCTGCACACCTTCCAGCTGGCACCCACAGATCACCAATTATGAAGCATTCACATTCACCTTCTGAGGAAAAGAATAATCATAGTGTTCATTCAAACTCACCGGCCTCATCATCCTCCACACACACCATCACAACTTCACCACCTGCCTAA 1116 0.44 MQFAEKMQPLKMGFREYIEALEEERKKIQVFPKELPLSLELVTQAIEACRQQLCGTVAEYNLNAQSECSEQTSTDGPVFEEFIIPIKKKASQASVEEDDDEEHSHKHTKTTTDKKKSDWLRSVQLWNPNPPPTKEDVVPRKTNVVEVKRNGGGAFQPFQREEKSGVSKANNNNEASAIGKAPSSPPVPATSYTEPVRVDSKKEEKGDAQRKQRRCWSQELHKRFLHALQQLGGADSATPKQIRELMKVDGLTNDEVKSHLQKFRLHTRRSPIIHNSASSQAGSLFLVGNIFVQPPEYATSSASGGELTTATPAAPTGIYAPVAAHLPAGTHRSPIMKHSHSPSEEKNNHSVHSNSPASSSSTHTITTSPPA* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0824 371 MobiDBLite consensus disorder prediction 196 214 - -
Gso2g0824 371 Gene3D - 210 268 - -
Gso2g0824 371 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 3 367 IPR044787 GO:0003700|GO:0006355
Gso2g0824 371 MobiDBLite consensus disorder prediction 348 371 - -
Gso2g0824 371 MobiDBLite consensus disorder prediction 163 179 - -
Gso2g0824 371 MobiDBLite consensus disorder prediction 90 214 - -
Gso2g0824 371 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 3 367 - -
Gso2g0824 371 MobiDBLite consensus disorder prediction 91 120 - -
Gso2g0824 371 MobiDBLite consensus disorder prediction 329 371 - -
Gso2g0824 371 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 208 268 IPR017930 -
Gso2g0824 371 Pfam Myb-like DNA-binding domain 213 262 IPR001005 -
Gso2g0824 371 SUPERFAMILY Homeodomain-like 209 269 IPR009057 -
Gso2g0824 371 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 211 266 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0824 Gso-Chr2 9118986 9121681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0824 1 324 G2-like Transcription Factor Family AT1G68670 47.143 1.63e-76 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso2g0824 Myb_DNA-binding 2.2e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0824 2 9118986 9121681 Gso2g0824 2 9118986 9121681 ECH
Gso1g0730 1 25160094 25162637 Gso2g0824 2 9118986 9121681 GST