Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0814 ATGGCACCTCTCACTTATCTCTTCTTCCCACTTTTCCTCCTCTTTGCCTTAACACACTCCCGAAGCACACCACACTCCTCCAAAACGACACTCCTCGACGTCGTTTCCTCCCTCCAAAACGCACACAATGCCGTTGCCTTCACCCCCCATCACCTTAACCAACACCAACGACAACAAGAAGCCTCGCTTCTATCGTCGTCGTTTGGTATTCACTTACGTTCCCGAGCCTCAATTCAGAAACCCTCCCACAGAGACTACAAATCGCTAACCTTATCTCGACTCGCTCGCGACTCAGCCCGAGTCAAATCTTTACAAACTCGCCTGGATCTCGTTCTGAAACGCGTCTCGAACTCGGATCTCCACCCGGCCGAGTCAAACGCCGAGTTCGAAGCCAACGCGCTACAAGGTCCTGTTGTGTCGGGAACGAGTCAGGGAAGCGGCGAGTACTTCCTCCGAGTCGGAATCGGAAAGCCACCGAGTCAGGCCTACGTGGTGCTCGACACGGGAAGCGACGTGAGCTGGATCCAATGCGCGCCGTGCTCCGAATGCTACCAACAATCGGATCCAATTTTCGACCCAGTTTCGTCGAATTCGTACTCTCCGATCCGCTGCGACGCGCCGCAGTGTAAGTCCCTGGACCTCTCCGAGTGCCGCAACGGCACGTGCCTCTACGAAGTCTCCTATGGCGACGGATCATACACCGTCGGAGAGTTCGCCACGGAGACGGTGACGCTCGGCACGGCGGCGGTGGAGAACGTAGCCATCGGATGCGGCCACAACAACGAAGGACTGTTCGTCGGCGCCGCCGGTTTGCTCGGCCTCGGCGGCGGAAAGCTCTCTTTTCCAGCACAGGTCAACGCGACGTCGTTTTCTTACTGCCTCGTGAACCGCGACTCCGACGCCGTTTCAACTCTGGAGTTCAACTCTCCGTTGCCTCGAAACGTCGTTACTGCGCCGTTAATGCGGAATCCCGAGCTCGACACGTTTTATTATCTCGGATTGAAAGGAATCAGCGTTGGCGGAGAAGCTCTTCCGATTCCGGAATCGATTTTTGAGGTTGACGCCATCGGCGGCGGAGGGATTATTATCGATTCCGGCACGGCGGTGACGCGGCTTAGGAGTGAGGTTTACGACGCGCTCCGCGACGCGTTTGTGAAGGGGGCGAAGGGGATTCCGAAGGCGAACGGCGTGTCGTTGTTTGATACATGCTACGACTTGTCATCGAGGGAGAGTGTGCAGGTTCCGACGGTGTCGTTTCATTTTCCCGAAGGGAGGGAGTTACCGTTACCAGCGAGGAATTACCTGATACCGGTTGACTCGGTGGGGACGTTCTGCTTCGCGTTTGCGCCCACGACGTCGTCGCTTTCAATCATGGGGAACGTGCAGCAGCAGGGGACACGTGTCGGTTTCGATATCGCGAACTCGCTCGTTGGATTCTCTGCTGATAGCTGCTAA 1455 0.5656 MAPLTYLFFPLFLLFALTHSRSTPHSSKTTLLDVVSSLQNAHNAVAFTPHHLNQHQRQQEASLLSSSFGIHLRSRASIQKPSHRDYKSLTLSRLARDSARVKSLQTRLDLVLKRVSNSDLHPAESNAEFEANALQGPVVSGTSQGSGEYFLRVGIGKPPSQAYVVLDTGSDVSWIQCAPCSECYQQSDPIFDPVSSNSYSPIRCDAPQCKSLDLSECRNGTCLYEVSYGDGSYTVGEFATETVTLGTAAVENVAIGCGHNNEGLFVGAAGLLGLGGGKLSFPAQVNATSFSYCLVNRDSDAVSTLEFNSPLPRNVVTAPLMRNPELDTFYYLGLKGISVGGEALPIPESIFEVDAIGGGGIIIDSGTAVTRLRSEVYDALRDAFVKGAKGIPKANGVSLFDTCYDLSSRESVQVPTVSFHFPEGRELPLPARNYLIPVDSVGTFCFAFAPTTSSLSIMGNVQQQGTRVGFDIANSLVGFSADSC* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0814 484 PANTHER ASPARTYL PROTEASES 8 484 IPR001461 GO:0004190|GO:0006508
Gso2g0814 484 ProSiteProfiles Peptidase family A1 domain profile. 149 480 IPR033121 -
Gso2g0814 484 Gene3D Acid Proteases 122 307 IPR021109 -
Gso2g0814 484 Gene3D Acid Proteases 308 484 IPR021109 -
Gso2g0814 484 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 8 484 - -
Gso2g0814 484 Pfam Xylanase inhibitor N-terminal 149 306 IPR032861 -
Gso2g0814 484 SUPERFAMILY Acid proteases 142 484 IPR021109 -
Gso2g0814 484 Pfam Xylanase inhibitor C-terminal 330 480 IPR032799 -
Gso2g0814 484 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 164 175 IPR001969 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0814 Gso-Chr2 8844615 8846810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0814 139 484 Miscellaneous Gene Families AT1G77480 25.253 3.25e-22 97.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0814 2 8844615 8846810 Gso2g0814 2 8844615 8846810 ECH
Gso1g0710 1 24301721 24303637 Gso2g0814 2 8844615 8846810 GST