Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0764 ATGGTCTTCCCGTCCCTTCCAATCTATCTAGATCCACCCAACTGGTCACAACAGCAGCCTAATCAGCAAGCAGGAATTGGCACTAATAATCCACAGATTCCACCACCTCTGCAGCCGTCACCACCTTCATCGGTGACGACAGGTATCGGAGGTGGTGACTATATTCAAGGCTCTATCAGACCAGGATCAATGGCTGATAGAGCCAGGATGGCCAAGATACACCAACCCGATGCAGCACTCAAATGTCCACGATGTGAATCCACAAACACCAAGTTTTGCTACTACAACAACTACAGCCTCTCACAGCCTCGCCACTTTTGCAAGACTTGTCGTCGTTACTGGACCAGAGGAGGTGCACTCAGGAGCGTGCCAGTTGGAGGTGGCTGCAGAAGGAACAAAAGAAACAAAGGGAACAGTGCTAGATCAAAGTCTCCTATGAAACCTTCAGCAAGTGCTAATTCTTCTTCTAGTGGCTGCACCCCTGATCATGTGATGATGACTCATTTGCCAACTCCAATAACACCAACTCAATTCCCATTCTTGGCCTCTTTACATCATTATAATGGCGACTACGTTTCTGGGGGCATTGGATCTCATTTTGGGGCGATCACAACACCTTTGGTGGCTAGAAATAATGGCAACAACACTAGTGATGTTGAGTTTCAAATTGGTACTAGTTCAGCTTCATCACTTGGTAATATTAGTGGAGGGGCTATGTTGTCAAATAATGGCCTTGGTGATCAGCAATGGAGGTTTAACAATCTGCAACAAGTTCAACATCAGTTCCCTTTCTTGAGTACTAATTTTGAGCCACAAATTGGGGTGTTTCAGTTTGGTGGTGGAGAAAATAACAATGCTGAACCGCCAAGTTATGCAAAGGATCATGGAGGCCGGTTTAATAATATTCGTTCTAAAATGGATTCTATTAATTCTAGTGTAAGTGGAATAGTGCCTCAGCTTAATACAATAAAGCTGGAAGAGAATCAAGGTTTGAGTTTGTCAAAAAATCTCTTGATGACTAGTTCGGGAAATGGTGTACTTTGGAATAATGGAAGTAGTGGCAATGCATGGAGTGAGGTTCCTAGTTTCATTCCTTCACCTAACCACTTGTTGTGA 1116 0.4409 MVFPSLPIYLDPPNWSQQQPNQQAGIGTNNPQIPPPLQPSPPSSVTTGIGGGDYIQGSIRPGSMADRARMAKIHQPDAALKCPRCESTNTKFCYYNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRNKGNSARSKSPMKPSASANSSSSGCTPDHVMMTHLPTPITPTQFPFLASLHHYNGDYVSGGIGSHFGAITTPLVARNNGNNTSDVEFQIGTSSASSLGNISGGAMLSNNGLGDQQWRFNNLQQVQHQFPFLSTNFEPQIGVFQFGGGENNNAEPPSYAKDHGGRFNNIRSKMDSINSSVSGIVPQLNTIKLEENQGLSLSKNLLMTSSGNGVLWNNGSSGNAWSEVPSFIPSPNHLL* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0764 371 ProSitePatterns Zinc finger Dof-type signature. 82 118 IPR003851 GO:0003677|GO:0006355
Gso2g0764 371 MobiDBLite consensus disorder prediction 124 168 - -
Gso2g0764 371 MobiDBLite consensus disorder prediction 11 56 - -
Gso2g0764 371 ProSiteProfiles Zinc finger Dof-type profile. 80 134 IPR003851 GO:0003677|GO:0006355
Gso2g0764 371 MobiDBLite consensus disorder prediction 11 31 - -
Gso2g0764 371 PANTHER DOF ZINC FINGER PROTEIN DOF3.6 10 362 - -
Gso2g0764 371 Pfam Dof domain, zinc finger 78 134 IPR003851 GO:0003677|GO:0006355
Gso2g0764 371 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 10 362 IPR045174 GO:0003700|GO:0006355
Gso2g0764 371 MobiDBLite consensus disorder prediction 141 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0764 Gso-Chr2 8138401 8140467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0764 1 136 C2C2-Dof Transcription Factor Family AT2G37590 59.310 7.96e-46 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gso2g0764 zf-Dof 3.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0764 - - gmx:100787357 716.457