Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1406 ATGCCAGTGCCTTCCAAACCCATAAACACCTTCACCATCACAATCATGCTCACCTTCACCTTCTTCCTCCTCTTCTTCTCCGGTTTCCTCCACTTCCCCTCCGCTTCCTCCTCCTCTTTCCCTCCCATCACCCGCCCCACAACCACGCCGCCCACGGCGGAACCCTTCTCCGATCTGGTCGCGGCCTTCAGGAAATGGGATTCCCAAGTGGGCTGCGCTCGCTTCAAACAAAAACCAAATGGGGTGCCCCTTAACCACTCAAAGGTCGCGTCTTTGCAGGAAGTTAGCGATTGCGGGGGCTTGAAACTCAACCATGTTAGCGTTTTGGTCAAAGGGTGGACTTGGATTCCCGATAACTTGGATAACTTGTACTCCTGCTCATGTGGGTTGAGCTGCTTGTGGACCAAATCGCCCGTTCTCGCTGACAAGCCTGATGCGTTGTTCTTTGAATCTTCCACGCCTCCGCTTCAGAGGCGCGTGGGAGAACCTCTTCGTGTATATATGGATCTTGAAGCTGGCCGAAAGAGATCAGGTCGAGAGGACATATATATTAGTTATCATGCTGAGGATGACGTGCAGTCAACCTATGCTGGTGCGCTCTTTCACAATGGTCGAAACTACCATGTCTCCAATAAAAAAAACAGAGATATACTTGTTTATTGGTCTTCATCTCGGTGTCTTCCTCGAAGGAATGAACTTGCCAAGAAACTTCTCAGCTTACTGCCACATCATTCATTTGGCAAGTGCCTAAATAATGTTGGTGGTCTAGACATGGCTCTTTCTCTTTATCCTGAATGTGCCAATGACGCCAATGTTACACCAAAATGGTGGGATCATTTACATTGCGCCATGTCTCACTACAAGTTTGTTCTTGCAATTGAGAACACTTTTACTGAGAGCTACGTGACAGAGAAGTTATTCTATGCCTTAGACTCTGGTGCAGTTCCTATCTATTTTGGTGCACCAAATGTCATGGATTTTGTCCCTCCACATTCAATAATAGATGGTAGAAAATTCAACTCATTGGAAGAGTTGGCTTCGCACGTGAAGGCTGTAGCTAATGATCCAGTAGCCTATGCAGAATACCATGCATGGAGAAGGTGTGGTGTACTTGGTAACTATGGAAAAACTCGAGCTGTGAGCCTTGACACGTTGCCATGCCGATTATGTGAGGCTGTTAGCAGAAAAGGTGGAAGAAATGCGGGAAGCTAG 1212 0.4752 MPVPSKPINTFTITIMLTFTFFLLFFSGFLHFPSASSSSFPPITRPTTTPPTAEPFSDLVAAFRKWDSQVGCARFKQKPNGVPLNHSKVASLQEVSDCGGLKLNHVSVLVKGWTWIPDNLDNLYSCSCGLSCLWTKSPVLADKPDALFFESSTPPLQRRVGEPLRVYMDLEAGRKRSGREDIYISYHAEDDVQSTYAGALFHNGRNYHVSNKKNRDILVYWSSSRCLPRRNELAKKLLSLLPHHSFGKCLNNVGGLDMALSLYPECANDANVTPKWWDHLHCAMSHYKFVLAIENTFTESYVTEKLFYALDSGAVPIYFGAPNVMDFVPPHSIIDGRKFNSLEELASHVKAVANDPVAYAEYHAWRRCGVLGNYGKTRAVSLDTLPCRLCEAVSRKGGRNAGS* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1406 403 PANTHER ALPHA-(1,4)-FUCOSYLTRANSFERASE 15 401 - -
Gso20g1406 403 PIRSF FucT_plant 2 403 IPR017177 -
Gso20g1406 403 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 15 401 IPR001503 GO:0006486|GO:0008417|GO:0016020
Gso20g1406 403 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 99 395 - -
Gso20g1406 403 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 214 396 IPR001503 GO:0006486|GO:0008417|GO:0016020
Gso20g1406 403 Gene3D - 167 370 IPR038577 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1406 Gso-Chr20 44239356 44243319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g1406 3 402 Xyloglucan Fucosyltransferase1 AT1G71990 69.327 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1406 K14412 - gmx:100791990 770
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1406 20 44239356 44243319 Gso10g1952 10 46485401 46489134 GST