Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0379 ATGATGATGTTTGAAGATATGGGTTTTTGTGGGGATTTGGATATGTTTTCTGCTCCCCTTGGAGAAGGGGACATTACCACCCGGCAAACTGAGCCAGAGGTGATAGTTGAGGATGATTATAGTGATGAAGAAATTGATGTAGACGAGCTCGAGAGGAGGATGTGGAGGGACAAAATGCGTCTGAAGCGATTGAAGGAGCAAAGTAAACCTAAGGAAGGAATTGATGCTGTGAAGCAGAGGCAGTCCCAAGAACAAGCAAGGAGGAAAAAGATGTCAAGGGCTCAAGATGGAATCTTGAAGTACATGCTGAAGATGATGGAGGTTTGTAAGGCCCAAGGTTTTGTCTATGGCATTATTCCAGAGAAGGGAAAGCCAGTGACTGGAGCATCTGATAATCTTCGTGAATGGTGGAAGGACAAAGTCCGGTTTGATCGAAATGGTCCTGCTGCCATAACCAAGTATCAAGCTGATAACGCTATTCCGGGGAAGAATGATGGATGCAATCCGATCGGTCCAACACCACACACCTTGCAAGAGCTGCAAGACACAACCTTGGGTTCTCTCTTGTCAGCACTCATGCAGCACTGTGATCCTCCTCAGAGGCGTTATCCATTGGAGAAGGGCGTTCCTCCACCATGGTGGCCTAATGGTAATGAAGAGTGGTGGCCCCAAATAGGTTTGCCTAAAGATCAAGGTCCTCCACCTTACAAGAAACCTCATGACCTGAAGAAGGCATGGAAAGTTGGTGTTCTGACTGCAGTTATCAAGCACATGTCTCCTGATATCGCAAAAATTCGCAAGCTCGTGAGGCAATCCAAATGCCTTCAAGATAAGATGACAGCCAAGGAAAGTGCAACCTGGCTTGCAATAATCAATCAAGAGGAGGCCTTGGCGCGTGAGCTTTACCCGGATTATTGCCCTCCATTAGCAGCCTCTTCTGGAGGTAGTGGATCTATGGTAATCAATGATTGCAATGAGTATGATGTTGAAGGGGGTGACGATGAGCCAAACTTTGACGTCGAAGATCGCAAACCTGAGAATCTTCATGCACCGAATCTTGGGATGGACAGAATGATGGGAAGACTGCCTTCTTTCCCAATCAAGGGAGAGGCTGTTACAAATTTGGATTTCATTCGGAAGAGGAAGATCTCTGGTGACTTCAACATGATAATGGATCAGAAAATTTACACATGCGAACAACCTCAGTGCCCTTACAGTGAAATTCACCATGGTTTTGCTGACAGAAATTCTAGGGACAACCATCGATTGAGTTGTCCTTATAGAGGCAGTGCTTCAACAGATTATGGAGGTTCAAATTTTCATGTTAATGAGGCAAAGCCGGTCATATTCCCCCAACAGTCCTTTGTTCAACCAAAACCTACTACTACTCCGTCTGTTGTTAACTTGGTTCCATCTGTTATTGATCTAACCGGACTCGGAGTTCCAGAAGATGGCAAGAAAATGATCACTGACCTTATGTCAATCTATGATACAAATGTTCAAAGCAACAAAAATCTAAGTTCCAGTAACCATGTATCTGCAGAAAATCCAAACCTTCCTCAGCCAGGCATTCAGCAGCAACATGACAACTTCTTTCGCAGTCAAGGAATCAGTATGGAAGGAAACTTCTTTGAAGAAGCCAACATGTCCAACAACAATCATCACATGTTTGCAAGGGAGGAAGGTCAATTTGACCGGTTCAAAGCTTTGAATGCACCACCCTTTGAGACCAATCACAACAACAACAACTTCCATTTGATGTTTGGTTCCCCTTGTGATTTGGCATCCTTTGATTTCAAGGAGGATATGCAAGGAGGAGTAGTAGGGATGGATGCTCTTCAGAAACAGCCTGATATCTCTATTTGGTACCAGTGA 1875 0.4464 MMMFEDMGFCGDLDMFSAPLGEGDITTRQTEPEVIVEDDYSDEEIDVDELERRMWRDKMRLKRLKEQSKPKEGIDAVKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQADNAIPGKNDGCNPIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRYPLEKGVPPPWWPNGNEEWWPQIGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELYPDYCPPLAASSGGSGSMVINDCNEYDVEGGDDEPNFDVEDRKPENLHAPNLGMDRMMGRLPSFPIKGEAVTNLDFIRKRKISGDFNMIMDQKIYTCEQPQCPYSEIHHGFADRNSRDNHRLSCPYRGSASTDYGGSNFHVNEAKPVIFPQQSFVQPKPTTTPSVVNLVPSVIDLTGLGVPEDGKKMITDLMSIYDTNVQSNKNLSSSNHVSAENPNLPQPGIQQQHDNFFRSQGISMEGNFFEEANMSNNNHHMFAREEGQFDRFKALNAPPFETNHNNNNFHLMFGSPCDLASFDFKEDMQGGVVGMDALQKQPDISIWYQ* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0379 624 PANTHER ETHYLENE INSENSITIVE 3-LIKE 1 PROTEIN 1 623 - -
Gso20g0379 624 MobiDBLite consensus disorder prediction 336 355 - -
Gso20g0379 624 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 1 623 IPR006957 GO:0005634
Gso20g0379 624 Coils Coil 47 67 - -
Gso20g0379 624 Gene3D - 172 305 IPR023278 GO:0003700|GO:0005634
Gso20g0379 624 MobiDBLite consensus disorder prediction 64 91 - -
Gso20g0379 624 Gene3D - 80 157 IPR023278 GO:0003700|GO:0005634
Gso20g0379 624 Pfam Ethylene insensitive 3 48 295 IPR006957 GO:0005634
Gso20g0379 624 SUPERFAMILY DNA-binding domain of EIN3-like 174 298 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0379 Gso-Chr20 11390508 11394010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0379 2 623 EIL Transcription Factor Family AT3G20770 63.426 0.0 766
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Gso20g0379 EIN3 4.4e-130 No_clan