Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1033 ATGGCAACCCAATTAAACAATGTGTTCAGAACTTCAATTCTGAAGCACAAGATCCAATCAGAGACCCCTTTGAAAACCACAATAAGAACCACAAGATTTCAAGTGATCAATGCTACCAGCAGTGCAAGGCAGCTCATAGAGTCTGGCACAGTGAGGCCAATATTGCCAAAAGATGCTTCCACAGCCATAAACTCAGAGGGATTTGTTCTCCTTGATGTTAGACCAACTTGGGAGAGAGAAAAGGCCCGTGTGGCAGGGTCTTTGCACGTGCCAATGTTTGTGGAGGACACGGATAACAGTCCCATAACTCTGCTTAAGAAGTGGGTGCATTTTGGGTACATTGGCTTGTGGACTGGCCAGTACCTCACTACTTTGAATTCTGAGTTCCTTAGTCAAGTGGAAAATGCCATTCCTGGTAAGGAGGCCAAGCTTCTTGTGGCGTGTGGAGAAGGGTTAAGGTCAATGACAGCAGCTTCAAAACTGTATAACGGAGGTTACAAAAATCTGGGATGGTTGGCTGGAGGCTTTAATCGTTCTAAGAACAACGACTTCCCAGCAGTAGAAGGAAAAGAGAAGTTGCAGCATGCAACAGTTGGGGGTGTTTCTTACATATTCCTTCAGTTGCTCATATTATTAAAGGCTGTTGATTAA 651 0.4455 MATQLNNVFRTSILKHKIQSETPLKTTIRTTRFQVINATSSARQLIESGTVRPILPKDASTAINSEGFVLLDVRPTWEREKARVAGSLHVPMFVEDTDNSPITLLKKWVHFGYIGLWTGQYLTTLNSEFLSQVENAIPGKEAKLLVACGEGLRSMTAASKLYNGGYKNLGWLAGGFNRSKNNDFPAVEGKEKLQHATVGGVSYIFLQLLILLKAVD* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1033 216 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 40 190 IPR036873 -
Gso1g1033 216 Pfam Rhodanese-like domain 56 178 IPR001763 -
Gso1g1033 216 ProSiteProfiles Rhodanese domain profile. 64 188 IPR001763 -
Gso1g1033 216 SMART rhod_4 54 185 IPR001763 -
Gso1g1033 216 CDD RHOD 58 177 - -
Gso1g1033 216 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 10 1 216 IPR044614 -
Gso1g1033 216 Gene3D - 51 198 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1033 Gso-Chr1 42305633 42306681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1033 1 203 Sulfurtransferasese or Rhodanese AT3G08920 55.882 3.07e-80 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1033 - - gmx:100795945 430.639